Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2018 ATGATGCTGTCCCTAAAGATTAGTTTGACTACAGTCGTTGTCCTTTCCATTGTATCCATAGTTTCCCATGCTGAAGCAAGCTTGGATGTTGAAATTGAAGCCTTGAAAGCTTTCAAGAACTCCATCACTGATGACCCAAGTGGGGCTCTAGCAGACTGGGTAGACACTCACAACCACTGCAACTGGTCTGGCATTGCATGTGACCCATCTTCAAATCAAGTCATTTCTATTTCTCTGGTTGGTCTTCAACTGCAAGGGAAGATTTCACCTTTCCTTGGGAACATTTCAGGCCTTCAGGTTTTTGATATAACTTCAAACTCATTCACTGGCTACATTCCTGCTCAGCTCAGTCTTAATACTCAACTTACACAACTCATTCTTTATAACAATTCTCTCTCAGGTCCTATCCCTCCACAATTAGGTAGCCTTAAAAGCCTGCAGTATTTGGATTTAGGTAACAACTTCTTGAATGGAAGCCTCCCTGACAGCATTTTCAACTGCACTTCTTTGTTGGGTATTGCTTTTAATTTCAACAACCTTACTGGCAAAATTCCATCAAACATAGGGAATCTAGTTAACCTTGTACAGATTATAGGTTATGGAAATAATTTAGTAGGATCTATACCCCTTTCCGTAGGTCAGTTAGGAGCTTTGCGAGCTCTTGATTTTAGCGAAAACAAGTTATCAGGTGTAATACCTAGAGAGATTGGAAACCTGACAAAATTAGAATACCTTGAATTGTTTGAAAATTCCTTGAGTGGAAAAATTCCTTTTGAACTTGGTAAGTGTAGCAATCTTTCAGGCCTTGAGTTATCCGACAATCAGCTTATTGGAAGTATTCCTCCTGAGCTAGGAAATTTAGTCCAGTTGAAGAAATTGAAGTTACACAAGAATAACTTGAATTCCACCATCCCTTCAGCCATATTCCAGTTGAAATCATTAACAAATCTAGGCCTCTCACAGAATAACTTAGAGGGAACAATATCTTCTGAGATTGGATATATGAACTCCTTGCAAGTTCTAACCCTGCATTTAAACAAGTTAACTGGGGAGATCCCTTCATCAATAACAAACTTGACAAACTTGACATACCTGTCAATGAGCCAGAATCTCCTCTCAGGTGAACTTCCTTCAAACTTGGGTGTGCTTCATAATTTGCAGTTTCTTGTTTTGAACGACAACCACTTTCATGGATCCATTCCCCCTAGCATTACCAATTGTACTGGACTGGTAAATGTAAGTTTGTCTTTTAATGCTTTAAGTGGGAAAATTCCTCAGGGTTTTTCCAGGTCACCAAATCTTACTTTCCTGTCTCTTGCGTCCAACAAAATGACTGGGGAAATCCCAGATGACCTCTACAACTGCTCAAATCTTAGCACTCTCAGTTTGGCAATAAATAACTTCAGTGGATTGATAAAATCAGGTATTCAAAACCTGTCTAAACTTCAACGCCTACAGTTGAATGTAAATTCTTTCACAGGACCAATTCCACCAGAGATCGGAAACTTGAATCAACTCATTACTCTATCCCTCTCTGAAAATAAGTTTTCAGGTCAAATTCCTCCAGAACTGTCCAAACTTTCTCGCCTACAGGGGCTCACTCTTCATGCCAATGTGTTAGAAGGTACAATACCTGATAAGCTCTCCGAATTAAAAGGACTAACCGAACTTTTCCTGCATCAAAACAACTTGGTTGGTCAAATACCTGATACTCTCTCAAAGCTTGAGATGCTTTCCTACTTAGACCTTCATGGCAACAAACTTAATGGGTCCATTCCAAGAAGCATGGGGAAGCTAAATCAACTTTTAGTTTTGGATCTCTCTCACAACCAGCTCATAGGATCAATTCCTGGAGATGTCATTGCAAACTTAAAAAGCATGCAGATGTATCTCAACCTTTCTTACAACCACTTGGTCGGAAATATTTCAACTGAGTTGAGCATGTTGGAAATGATACAGGCTATTGACATTTCAAACAATAATCTTTCGGGTTCCATTCCCAGAACACTTTCTGGGTGCAGAAATCTGTTTAATCTTGATTTTTCAGGAAACAGTATTTCAGGTCCTATTCCCGCAGAAGCATTTGGTCACATGGACTTGCTTGAAAGCTTAAACCTCTCAAGGAACCATTTAGATGGTGGAATCCCTGAAGTACTGGCAGAACTTGATCATCTTAGTTCCGTAGATCTTTCTCTGAATGACTTGAAAGGAATTATTCCTGAGGGCTTTGCCAACCTTTCCAACTTGGTGCATCTCAACCTTTCCTTCAATCAACTAGAAGGTCCTGTTCCTAAGACAGGAGTATTTGCACACATCAATGCATCTAGTGTGATGGGAAACCAGGATCTTTGTGGAGCTAAATTCCTACCGCCATGCAGGAAGATAAAACATTCACTTTCCAAGAAGGGCATATCTATTATTGCTTCACTTGGATCTCTAGCTATACTTCTAGTGCTAGTGATTCTAATTCTCAGTCGCGGTACTAAACTCTGTAATTCTAAAGAGAGAGATATCAGTGTAAATCATGGACCAGACTACAACTCAGCATTGGCACTTAAAAGGTTCAGTCCAAAGGAATTGGAGAATGCCACTAGATTTTTCAGTGCGGACAGCATCATTGGTGCTAGCAGTTTGAGCACAGTTTACAAGGGCCAAATGGAAGATGGCCAGGTTGTTGCCATAAAAAGGTTGAATTTGCAACAATTCTCTGCCAATACTGACAAGATCTTCAAGAAAGAAGCCAACACCTTGAGCCAGTTGAGACATAGGAATTTGATCAAGATACTTGGATATGCCTGGCAGAGCGGGAAAATGAAGGCTTTGGTTCTGGAGTATATGGAAAATGGAAATTTGGATAGCATCATACATGGCAACGGGGTAGATCATCCTGTGATCTCTAGGTGGACATTATCTGAAAGAGTCCAAGTCTTCATATCTATTGCTAAAGCATTGGATTATTTGCACTCGGGTTATCATATTCCCATTGTGCACTGTGATTTAAAGCCTTCTAACGTTCTTTTAGATAAAGAGTGGGAAGCTCATGTCAGTGACTTTGGGACAGCTCGAATTCTTGGTTTTCATCTACAAGAAGGTAGTACCCTTTCGTCATCAGCAGCTGTGCAAGGCACAGTTGGCTACATGGCTCCAGAATTTGCCTACACGAGGAAAGTGACCACTAAAGCAGATGTGTTCAGCTTTGGTATCATAGTAATGGAGTTCCTAACAAAAAGAAGGCCGACAGGACTCTCGGAAGAGAATGGTTTACCAATCACTTTGCGTGAATTAGTGGCAAAAGCCCTTGCAAATGGAATAGAACAACTTGTCAATATTGTGGATCCTTTGTTGACCTGGAATGTTACAAAAGACAATGATGAAGTGTTGGCAGAGCTCTTTAAGCTATCTCTATGCTGCACCATACCTGATCCTGAACAGAGACCCAATACGAATGAGGTGTTATCTGCCCTTGTGAAGCTTCAAACAACACTGTCTTGTTAA 3495 0.4043 MMLSLKISLTTVVVLSIVSIVSHAEASLDVEIEALKAFKNSITDDPSGALADWVDTHNHCNWSGIACDPSSNQVISISLVGLQLQGKISPFLGNISGLQVFDITSNSFTGYIPAQLSLNTQLTQLILYNNSLSGPIPPQLGSLKSLQYLDLGNNFLNGSLPDSIFNCTSLLGIAFNFNNLTGKIPSNIGNLVNLVQIIGYGNNLVGSIPLSVGQLGALRALDFSENKLSGVIPREIGNLTKLEYLELFENSLSGKIPFELGKCSNLSGLELSDNQLIGSIPPELGNLVQLKKLKLHKNNLNSTIPSAIFQLKSLTNLGLSQNNLEGTISSEIGYMNSLQVLTLHLNKLTGEIPSSITNLTNLTYLSMSQNLLSGELPSNLGVLHNLQFLVLNDNHFHGSIPPSITNCTGLVNVSLSFNALSGKIPQGFSRSPNLTFLSLASNKMTGEIPDDLYNCSNLSTLSLAINNFSGLIKSGIQNLSKLQRLQLNVNSFTGPIPPEIGNLNQLITLSLSENKFSGQIPPELSKLSRLQGLTLHANVLEGTIPDKLSELKGLTELFLHQNNLVGQIPDTLSKLEMLSYLDLHGNKLNGSIPRSMGKLNQLLVLDLSHNQLIGSIPGDVIANLKSMQMYLNLSYNHLVGNISTELSMLEMIQAIDISNNNLSGSIPRTLSGCRNLFNLDFSGNSISGPIPAEAFGHMDLLESLNLSRNHLDGGIPEVLAELDHLSSVDLSLNDLKGIIPEGFANLSNLVHLNLSFNQLEGPVPKTGVFAHINASSVMGNQDLCGAKFLPPCRKIKHSLSKKGISIIASLGSLAILLVLVILILSRGTKLCNSKERDISVNHGPDYNSALALKRFSPKELENATRFFSADSIIGASSLSTVYKGQMEDGQVVAIKRLNLQQFSANTDKIFKKEANTLSQLRHRNLIKILGYAWQSGKMKALVLEYMENGNLDSIIHGNGVDHPVISRWTLSERVQVFISIAKALDYLHSGYHIPIVHCDLKPSNVLLDKEWEAHVSDFGTARILGFHLQEGSTLSSSAAVQGTVGYMAPEFAYTRKVTTKADVFSFGIIVMEFLTKRRPTGLSEENGLPITLRELVAKALANGIEQLVNIVDPLLTWNVTKDNDEVLAELFKLSLCCTIPDPEQRPNTNEVLSALVKLQTTLSC* 1165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2018 1164 SMART LRR_typ_2 215 239 IPR003591 -
Pvu2g2018 1164 SMART LRR_typ_2 287 311 IPR003591 -
Pvu2g2018 1164 SMART LRR_typ_2 722 745 IPR003591 -
Pvu2g2018 1164 SMART LRR_typ_2 551 575 IPR003591 -
Pvu2g2018 1164 SMART LRR_typ_2 746 771 IPR003591 -
Pvu2g2018 1164 SMART LRR_typ_2 503 527 IPR003591 -
Pvu2g2018 1164 SMART LRR_typ_2 383 407 IPR003591 -
Pvu2g2018 1164 SMART LRR_typ_2 143 167 IPR003591 -
Pvu2g2018 1164 SMART LRR_typ_2 599 623 IPR003591 -
Pvu2g2018 1164 SMART LRR_typ_2 359 381 IPR003591 -
Pvu2g2018 1164 Gene3D Ribonuclease Inhibitor 27 176 IPR032675 -
Pvu2g2018 1164 ProSitePatterns Serine/Threonine protein kinases active-site signature. 995 1007 IPR008271 GO:0004672|GO:0006468
Pvu2g2018 1164 Gene3D Transferase(Phosphotransferase) domain 1 946 1163 - -
Pvu2g2018 1164 Gene3D Ribonuclease Inhibitor 273 377 IPR032675 -
Pvu2g2018 1164 Gene3D Ribonuclease Inhibitor 177 272 IPR032675 -
Pvu2g2018 1164 SUPERFAMILY L domain-like 292 538 - -
Pvu2g2018 1164 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 366 1159 - -
Pvu2g2018 1164 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 289 370 - -
Pvu2g2018 1164 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 2 295 - -
Pvu2g2018 1164 Pfam Leucine Rich Repeat 145 167 IPR001611 GO:0005515
Pvu2g2018 1164 SUPERFAMILY Protein kinase-like (PK-like) 846 1159 IPR011009 -
Pvu2g2018 1164 Pfam Leucine rich repeat 653 711 IPR001611 GO:0005515
Pvu2g2018 1164 Pfam Leucine rich repeat 529 588 IPR001611 GO:0005515
Pvu2g2018 1164 SUPERFAMILY L domain-like 474 795 - -
Pvu2g2018 1164 PRINTS Leucine-rich repeat signature 218 231 - -
Pvu2g2018 1164 PRINTS Leucine-rich repeat signature 599 612 - -
Pvu2g2018 1164 Gene3D Ribonuclease Inhibitor 620 800 IPR032675 -
Pvu2g2018 1164 Gene3D Ribonuclease Inhibitor 378 619 IPR032675 -
Pvu2g2018 1164 ProSiteProfiles Protein kinase domain profile. 867 1162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2018 1164 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Pvu2g2018 1164 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 366 1159 - -
Pvu2g2018 1164 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 289 370 - -
Pvu2g2018 1164 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 295 - -
Pvu2g2018 1164 SUPERFAMILY L domain-like 31 305 - -
Pvu2g2018 1164 Gene3D Phosphorylase Kinase; domain 1 832 945 - -
Pvu2g2018 1164 CDD STKc_IRAK 873 1158 - -
Pvu2g2018 1164 SMART serkin_6 867 1162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2018 1164 Pfam Protein kinase domain 869 1153 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2018 Pvu-Chr2 35339176 35343977 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2018 21 1159 Receptor kinase-like Gene Family AT5G46330 54.040 0.0 1159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pvu2g2018 Pkinase 2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2018 K13420 - gmx:100788119 1964.5