Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1926 ATGGCACATATAATGAGGTTTTCAACACTCGTAGTTGTGTTGCTTTTTTGTGTTTCTCCTACGCTTGTAGTCCTTGGTCTGGGCTACTCAGATCACACTACTAGAGTGCTGTTGGAAGTGAAGAAGTCTTTTGTGCAAGACCCACGAAATGTTCTGAGTGATTGGTCAGAAGATAACATTGACTACTGCAGTTGGAGAGGGGTGTCATGTGAATTGAACTCAGACTCAAACTCAATTTCAAACTCTTTAGATGGTGACTCCATGCAAGTGGTGGGTCTCAATCTCTCTGACTCGTCACTCACCGGGTCAGTATCACCTTCACTCGGTCGTTTGAAAAACCTGCTCCACCTTGATCTCTCCTCCAACAGCCTCACAGGTCCCATTCCACCCAATCTCTCCAACCTCACTTCCTTGGAATCTTTGCTTCTCTTCTCCAACCAACTCACGGGTCACATACCCAAAGAGTTCGGCTCGCTCAAGAGTCTCCGAGTCATGCGACTCGGTGACAATGCATTAACGGGAACGATTCCCGCTTCTCTCGCCAACCTGAATAATTTGGTCAACCTTGGCTTGGCTTCCTGCGGACTCACCGGGTCTATTCCCAGTCAACTTGGTCAACTCAAACTCATGGAGAATCTGATTCTGCAAGACAACGAGTTGATGGGTCCGATTCCGACCGAGTTAGGGAACTGCTCAAGCCTCACCATCTTCACTGCAGCTAACAACAAACTAAATGGATCAATCCCCAGTGAACTGGGTCGACTCAGCAATCTGCAAATTCTCAACTTTGCCAACAACAGTATATCAGGGAAGATTCCGAGTCAACTCGGTAATATGAGTCAACTCGTTTACCTGAACTTCATGGAGAACCAGCTCGAGGGTACCATTCCACCGTCTCTAGCTCAACTGGGCAATCTTCAAAATCTGGACTTCTCAATGAACAATCTCAGTGGAGGAATCCCAGAGGAGTTAGGCAACTTGGGTGAGCTAGCTTATTTGGTTCTGTCTGGTAACAACCTTAATGGTGTCATACCAAGGACCATATGTTCCAATGCAACAAGTTTGGAGCACTTGATGTTGTCAGAAAGTGGACTTCATGGTGAGATTCCAGCTGAGTTGAGTCAATGCCAGCAACTGATGCAACTTGATTTGTCCAACAATGCACTCAACGGGTCCATACCACTTGAGCTTTATGGGTTGCTGCGGTTAACTGATCTCCGCCTGAACAATAACAGCTTGGTTGGTTCCATCTCTCCCTTCATAGGGAACCTCAGTGGCTTGCAGACCCTTGCTTTGTTTCACAATAATTTGGAGGGTGTTCTGCCGAGAGAGATTGGAATGCTGGGCAAGTTGGAAATTTTGTATCTTTATGATAACCAATTGTCTGGGGCAATACCTGTGGGGATTGGTAATTGTTCTAGCTTGCAAATGATTGATTTTTTTGGAAACCGTTTCAGTGGGGAAATTCCCGTCACTATTGGAAGGCTGAAAGAGTTGAATTTCCTTCACCTTAGACAGAATGAGCTAGTGGGTGAGATTCCAGCAACCTTGGGTAATTGTCATAAACTGAACATTCTGGATTTGGCTGACAATCAGCTCTCAGGTGCAATTCCTGCAACGTTTGGATTCCTCAAGGAATTACAGAAACTCATGATCTACAACAATTCCCTGGAAGGTAATCTCCCTCACCAACTGATAACTGTAGCAAACTTGACCAGAGTGAATCTTTCTAAGAACAGATTGAATGGTAGTATAGCTGCATTGTGTAGCTCTCAATCATTTCTTTCTTTCGATGTTACTGACAACGAGTTTGATGGTGAAATTCCTTCCCAAATGGGAAACTCACCCTCCCTTGAGAGACTAAGATTAGGTAGCAATAAATTTTCTGGAGAAATTCCAAGGACATTGGGAAAAATCCGTGAGCTGTCATTGTTAGACCTCTCAGGAAATTCACTCACTGGACCAATACCAGCTGAGCTTTCTTTGTGCAACAAACTGGCTTATATTGATTTGAACAGTAATTTCCTTTTCGGGCAAATACCATCATGGCTTGGAAGTTTGTCTGAGTTGGGAGAGCTAAAGCTCTCCTCCAATAATTTTTCTGGGCCACTTCCATTAGGCCTATTCAAATGTTTTAAGTTGCTAGTTCTCTCTCTAAATGACAACTCCCTGAATGGAAGTCTCCCATCCGATATTGGTGAACTTGCAAACCTCAATGTCCTCAGACTTGACCACAATAAGTTTTCTGGACCAATCCCTTTGGAGATAGGGAAGCTGATCAAGCTTTATGAGCTCCGACTCTCCAGAAATGGATTCCATGGTGAGATGCCAGCTGAGATTGGAAAACTCCAAAATCTCCAAATCATTTTAGACCTTAGTTACAATAATCTCTCAGGTCTCATCCCACCTTCTCTTGGGACACAGTCAAAGTTAGAAGCTCTTGATCTTTCCCACAATCGACTAACTGGAGAAGTCCCTCCACAAATTGGGGAAATGAGCAGTTTGGGAAAGCTTGATCTCTCTTACAACAACCTTCAAGGAAAATTGGATAAGCAGTTTTCCCGCTGGCCAGACCAGGCATTTGAAGGAAACCTACATCTTTGTGGAAGCCCTCTTGAGAGCTGCCACCGAAATGACGACTCTGGGAATGCAGGCCTAAATGAATCAACAGTAGTGATAATCTCTTCCCTTTCAACTATAGCTGCAATTGCACTTCTGATACTCGCAGTTAGAATCTTTTCCAAAAACAAGCAAGAATTTTGCAGGAAAGCCAGTGAAGTGAATTATGTATACTCTTCTTCTTCATCACAAGCACAGAGAAGACCGCTGTTCCAACTAAATGCAGCTGGAAATAGAGATCTCAGATGGGAAGACATCATGGATGCCACGAACAATCTAAGTGAGGACTTCATGATTGGCTCAGGCGGTTCAGGGAAAATCTACAAAGCTGAATTGGCATCTGGAGAGACTGTGGCTGTCAAGAAGATTTCATCAAAAGATGAATTTCTGTTAAACAAAAGCTTCATAAGGGAAGTTAAGACACTAGGGAGGATTAGGCACAGACATCTGGTGAAGCTAATAGGATATTGTAGCAATAGAAACAAAGAAGCAGGTTGGAATCTGTTGATATATGAGTACATGGAGAATGGGAGTGTTTGGGATTGGCTTCACGGGAAACCAGGCAAGGAGAGCAAAGTAAAGAGCAGCCTTGATTGGGAGACAAGGTTCAAAATTGCTGTAGGATTAGCACAAGGAGTGGAATACCTGCATCACGATTGCGTCCCAAAGATCCTTCACAGGGACATCAAATCCAGCAACCTGTTGCTAGACTCAAAAATGGAGGCACACTTGGGAGATTTTGGACTGGCAAAATCACTAACCGAGAATTATGACTCTAATACTGAGTCTAATTCTTGGTTTGCTGGCTCTTATGGCTACATAGCTCCAGAGTATGCATACTCCCTACAGGCAACAGAAAAAAGTGACGTTTACAGCATGGGAATAGTGTTCATGGAACTTGTTAGTGGTAAAATGCCAACAAATGAAATTTTTGGAGATGAGATGAACATGGTGAAATGGGTAGAAATGCACGTGGATAAGCATGGTGAGGAATTGATAGATCCTGAATTGAAACCTCTTTTACCTGATGAAGAGTACGCTGCATTCAAAGTGCTTGAGATAGCCTTACAATGCACAAAAGCTACACCACACGAGAGGCCATCTTCAAGGAAAGCATGCGATCTTCTCCTCCACGTATTCAACAACAGGGTGGTGAACTTTGAGAAGAAGAATTTGGAATATTACAAATGA 3810 0.4362 MAHIMRFSTLVVVLLFCVSPTLVVLGLGYSDHTTRVLLEVKKSFVQDPRNVLSDWSEDNIDYCSWRGVSCELNSDSNSISNSLDGDSMQVVGLNLSDSSLTGSVSPSLGRLKNLLHLDLSSNSLTGPIPPNLSNLTSLESLLLFSNQLTGHIPKEFGSLKSLRVMRLGDNALTGTIPASLANLNNLVNLGLASCGLTGSIPSQLGQLKLMENLILQDNELMGPIPTELGNCSSLTIFTAANNKLNGSIPSELGRLSNLQILNFANNSISGKIPSQLGNMSQLVYLNFMENQLEGTIPPSLAQLGNLQNLDFSMNNLSGGIPEELGNLGELAYLVLSGNNLNGVIPRTICSNATSLEHLMLSESGLHGEIPAELSQCQQLMQLDLSNNALNGSIPLELYGLLRLTDLRLNNNSLVGSISPFIGNLSGLQTLALFHNNLEGVLPREIGMLGKLEILYLYDNQLSGAIPVGIGNCSSLQMIDFFGNRFSGEIPVTIGRLKELNFLHLRQNELVGEIPATLGNCHKLNILDLADNQLSGAIPATFGFLKELQKLMIYNNSLEGNLPHQLITVANLTRVNLSKNRLNGSIAALCSSQSFLSFDVTDNEFDGEIPSQMGNSPSLERLRLGSNKFSGEIPRTLGKIRELSLLDLSGNSLTGPIPAELSLCNKLAYIDLNSNFLFGQIPSWLGSLSELGELKLSSNNFSGPLPLGLFKCFKLLVLSLNDNSLNGSLPSDIGELANLNVLRLDHNKFSGPIPLEIGKLIKLYELRLSRNGFHGEMPAEIGKLQNLQIILDLSYNNLSGLIPPSLGTQSKLEALDLSHNRLTGEVPPQIGEMSSLGKLDLSYNNLQGKLDKQFSRWPDQAFEGNLHLCGSPLESCHRNDDSGNAGLNESTVVIISSLSTIAAIALLILAVRIFSKNKQEFCRKASEVNYVYSSSSSQAQRRPLFQLNAAGNRDLRWEDIMDATNNLSEDFMIGSGGSGKIYKAELASGETVAVKKISSKDEFLLNKSFIREVKTLGRIRHRHLVKLIGYCSNRNKEAGWNLLIYEYMENGSVWDWLHGKPGKESKVKSSLDWETRFKIAVGLAQGVEYLHHDCVPKILHRDIKSSNLLLDSKMEAHLGDFGLAKSLTENYDSNTESNSWFAGSYGYIAPEYAYSLQATEKSDVYSMGIVFMELVSGKMPTNEIFGDEMNMVKWVEMHVDKHGEELIDPELKPLLPDEEYAAFKVLEIALQCTKATPHERPSSRKACDLLLHVFNNRVVNFEKKNLEYYK* 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1926 1269 Pfam Protein kinase domain 971 1246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1926 1269 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1097 1109 IPR008271 GO:0004672|GO:0006468
Pvu2g1926 1269 ProSiteProfiles Protein kinase domain profile. 966 1254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1926 1269 Pfam Leucine rich repeat N-terminal domain 34 70 IPR013210 -
Pvu2g1926 1269 Gene3D Transferase(Phosphotransferase) domain 1 1047 1266 - -
Pvu2g1926 1269 Gene3D Ribonuclease Inhibitor 30 203 IPR032675 -
Pvu2g1926 1269 SUPERFAMILY L domain-like 593 872 - -
Pvu2g1926 1269 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 6 1263 - -
Pvu2g1926 1269 SUPERFAMILY Protein kinase-like (PK-like) 952 1249 IPR011009 -
Pvu2g1926 1269 Gene3D Ribonuclease Inhibitor 490 589 IPR032675 -
Pvu2g1926 1269 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 6 1263 - -
Pvu2g1926 1269 SMART LRR_typ_2 735 759 IPR003591 -
Pvu2g1926 1269 SMART LRR_typ_2 639 663 IPR003591 -
Pvu2g1926 1269 SMART LRR_typ_2 424 447 IPR003591 -
Pvu2g1926 1269 SMART LRR_typ_2 687 711 IPR003591 -
Pvu2g1926 1269 SMART LRR_typ_2 135 158 IPR003591 -
Pvu2g1926 1269 SMART LRR_typ_2 496 520 IPR003591 -
Pvu2g1926 1269 SMART LRR_typ_2 448 472 IPR003591 -
Pvu2g1926 1269 SMART LRR_typ_2 544 568 IPR003591 -
Pvu2g1926 1269 SMART LRR_typ_2 111 134 IPR003591 -
Pvu2g1926 1269 SMART LRR_typ_2 255 279 IPR003591 -
Pvu2g1926 1269 SMART LRR_typ_2 783 808 IPR003591 -
Pvu2g1926 1269 SMART LRR_typ_2 303 326 IPR003591 -
Pvu2g1926 1269 SMART LRR_typ_2 832 863 IPR003591 -
Pvu2g1926 1269 SMART LRR_typ_2 327 351 IPR003591 -
Pvu2g1926 1269 SMART LRR_typ_2 159 183 IPR003591 -
Pvu2g1926 1269 SUPERFAMILY RNI-like 92 414 - -
Pvu2g1926 1269 Gene3D Ribonuclease Inhibitor 590 883 IPR032675 -
Pvu2g1926 1269 Gene3D Phosphorylase Kinase; domain 1 926 1046 - -
Pvu2g1926 1269 Pfam Leucine Rich Repeat 113 135 IPR001611 GO:0005515
Pvu2g1926 1269 ProSitePatterns Protein kinases ATP-binding region signature. 972 995 IPR017441 GO:0005524
Pvu2g1926 1269 Gene3D Ribonuclease Inhibitor 396 489 IPR032675 -
Pvu2g1926 1269 PRINTS Leucine-rich repeat signature 811 824 - -
Pvu2g1926 1269 PRINTS Leucine-rich repeat signature 832 845 - -
Pvu2g1926 1269 SMART serkin_6 966 1254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1926 1269 SUPERFAMILY L domain-like 309 674 - -
Pvu2g1926 1269 Gene3D Ribonuclease Inhibitor 208 280 IPR032675 -
Pvu2g1926 1269 Gene3D Ribonuclease Inhibitor 350 395 IPR032675 -
Pvu2g1926 1269 Gene3D Ribonuclease Inhibitor 281 349 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1926 Pvu-Chr2 34255630 34260457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1926 36 709 Receptor kinase-like Gene Family AT1G17750 36.471 9.94e-101 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu2g1926 Pkinase 5.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1926 - - gmx:100801889 2103.56