Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1907 ATGTCTTTGGCTGCTCCGAGTTCCCTTTTGAAGGTGGAGGAAATACAAGGAAGAGGGAGGGGAATGGTTGCATCTCAGCCCCTTAAAGCCGGTCAAATTGTCCTAAAAGACTCTCCCATTCTGCTGTATTCAGCTTTGCCCTTGATCAGACAGTCTTTGTCATTGTCGTCCTCTGCCTCAATTTCATGTTTCTGTGATCACTGCTTCAGAACCTTGCCTCCAATTTTACAGGGAGATTCTTCATTATCCACAGTTTTGTGCCCCAATTGTCACTACCATCGCTTCTGCAGCTCAACTTGTCTTTCAAAGGCATTGAACTCCTCCCATTCTTCTTGGGTATGTCAAGCGTTATCTAGTCTCAGAGCCAATTCTCTACTGCTTGAACAGCCCCTTGAGTGCCAAGTCCAGGCTAATTTTCTCGTAGCTGCCTACAATCATGCCAATATCTCCCCTTCAGACTTCCAAATTATGCTTTCTCTCCAGGGTTCTCCTGATGATACCACCATTGCCGCAGCCCAGTTCCTACACCCTCTTATTTCATCTCTCTGCTCACTTTCTCTCATTAGTCCCCAGAATGGATTTTCTTTAGAACTCACTTGTGCACTTCTTGTCAAGGACAAGCTCAATGCCTTTGGAATAATGCAGCCCTTCTCTGCAGATGACGACCTGAGATCTGTCAGAGCTTATGGTATTTACCCTTATGCTTCCTTTTTTAACCATGATTGCCTTCCCAATGCCTGCAGATTTGATTATGTGGACAGCAATCCACATGAAGAAGGCCATAATACCGACTTTATTATTAGGATGATTAATGATGTTCCCCAAGGAAGGGAGATCTGCTTGAGTTATTTCCCTGTGAATGAAAACTATTCTAGTAGGCAAAAGAGATTGATTGAAGATTATGGCTTCTCCTGTAATTGTGATCGATGTAATGTGGAGTCAAATTGGTCAGATAATGATAGTGTTGAAGATAATGTTGCTGAGGATGAAGAGGAAGCTATGGATGAGGACCAATATGAAATTATGGAAGCGTCAGACAGTGACAAACATGCCCTTGAAGACAATAATGATTTCCCACATGCATATTTCTTTTTAAAATACATGTGTGATAGAACGAATTGCTGGGGAACATTAGCTCCATTACCTCCACAGGGCGATACTCCATCCAATGTCATGGAATGCAATGTCTGTGGCAAATTGAAGAGTGACGATACCTTTGATAATGATGAAGGTCTTGTGGAGGACTAA 1248 0.4279 MSLAAPSSLLKVEEIQGRGRGMVASQPLKAGQIVLKDSPILLYSALPLIRQSLSLSSSASISCFCDHCFRTLPPILQGDSSLSTVLCPNCHYHRFCSSTCLSKALNSSHSSWVCQALSSLRANSLLLEQPLECQVQANFLVAAYNHANISPSDFQIMLSLQGSPDDTTIAAAQFLHPLISSLCSLSLISPQNGFSLELTCALLVKDKLNAFGIMQPFSADDDLRSVRAYGIYPYASFFNHDCLPNACRFDYVDSNPHEEGHNTDFIIRMINDVPQGREICLSYFPVNENYSSRQKRLIEDYGFSCNCDRCNVESNWSDNDSVEDNVAEDEEEAMDEDQYEIMEASDSDKHALEDNNDFPHAYFFLKYMCDRTNCWGTLAPLPPQGDTPSNVMECNVCGKLKSDDTFDNDEGLVED* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1907 415 SUPERFAMILY SET domain 10 311 IPR046341 -
Pvu2g1907 415 ProSiteProfiles SET domain profile. 8 284 IPR001214 GO:0005515
Pvu2g1907 415 Gene3D - 64 123 - -
Pvu2g1907 415 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 2 410 IPR044238 -
Pvu2g1907 415 SMART set_7 8 290 IPR001214 GO:0005515
Pvu2g1907 415 Gene3D - 128 210 - -
Pvu2g1907 415 CDD SET_SMYD 208 310 - -
Pvu2g1907 415 Gene3D SET domain 21 310 IPR046341 -
Pvu2g1907 415 Pfam SET domain 19 283 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pvu2g1907 SET 2.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1907 - - gmx:100783406 687.567