Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1877 ATGGCTAATTTGGTAATGCAAGATGATGATAATGCTCCAATGACCTTCTTATTCTATGCATCAATATTCTTGGTCTTGGTAGCCTCCATTAGTTCCCAAGAAGAGAACAAACACCATGAGTGTAGCAAGCCATTCAGCTGCGGATTATTGTCCATCTACTACCCTTTCTGGGGAGGGAGCAGACCCAGTTATTGTGCCAGCAACCACCTGTTCAAGCTCAACTGTGAGGGTAATCAGAACTCCACCATTCAACTTGGCTCAGCAACTTTCCAAGTGCTTCACTTTGATCCAGCTCAATACACCGTGAAAATGGTTCGAACACGCCTTGTCTATGATAATTGCTCTTCCTCGGCCGTAACTAACAATTCCGTGGATTCAAATCTCTTTAGTTACTTGAATGTTAAGAACATAACCATCTACTATGGTTGTCCCTACTCCCTGATTTCAAATAGCACACGGTCTTTTCCATGCAAGGAAGATGGGCACATGGGTGCTTTCTATGGGGACCCTGCAACTATGAAAGTCCAGGACTGTGAAGGACCTAGGATTGAAGTGCAAGTAGGACAGGAACTTGATCCTGCTGGGGGAATTGAAGGGCTCAACCAAGCCTTGAGCAAAGGGTTTGAAGTACATCTTATTTCAGAGGCACAAGTTCAACACTGCTTAGAATGCATTTTATCTAATGGAACATGTGGGGCCAATGATGATTCTCAGTTTTTATGTTTTTGCCCCAATGGAAGTGAAGGTTTAGATTGCTCTCCTCCTCACAGAGATAAATGGAACTGGAAAAGGAAGGTGGTTATAGGCGTTGGTGCTGCTGTGATGAGTGCAATTGCTGTTGGACTTGGGTTTTACATCTATTATGGTCGTCAAAAGAAGAAGAATTATCTCCATGCAGTAACATCATCTGTACTACGTAATTCTAAAGGAATCCTACATAGTTCTTCTTTAGAAGACTCAGAGAAGGGAAGTAAATACTTTGGAGTCCACTTCTTCACCTATGGTGAACTTGAAGAGGCCACAAACTTCTTTGATCCTAAAAGAGAACTAGGAGACGGAGGATTTGGAAAAGTGTATTTTGGGAAACTTCATGATGGACGATTAGTTGCAGTGAAGAGAATGTACGAGAACAGTTTGAAAATTGAGCAATTCGTGAATGAAGTGGAGATCTTAACTGGGCTACACCACCAAAACCTTGTGTCTCTATACGGATGCACTCCTCGCCACAGTAGAGAACTTATGTTGGTATACGAATACGTTCCAAATGGAACCGTTGCTGATCATCTTCATGGTCAAAGAGCAAAACCTGGCACACTCCCTTGGCACATCAGAATGAACATTGCCATTGAGACTGCTAGTGCATTGGTGTATCTCCACGCTTCTGACATCATTCACAGAGACGTCAAAACCAACAACATTCTCCTTGACAACCACTTCAGTGTCAAAGTAGCAGATTTTGGCCTCTCACGTCTCTTCCCAACCCATGCCACACACATTTCCACTGCCCCACAAGGGACTCCTGGTTATGTGGATCCGGAGTATCATGAGTACTACCACCTCACTGATAAGAGTGATGTTTATAGCTTTGGGGTGGTGCTCATTGAGCTCGTATCATCCATGCATGCGGTTGATATCTCAAGGCGCAGGCATGAGATCAACTTGTCTAACATGGCCATCAAGAAGATCCAAAGTGGTGCGTTGCATGAGATTGTGGATCCCACTCTTGGGTTTGACTCTGATTTCAAGGTCAGGAAGATGATCAATGCAGTGGCTGAGTTGGCGTTTCAGTGCTTGCAGAGTTCCAAAGATGCCAGACCCTCCATGGCAGAAGTGTTAGATAGACTCGAGGATATAAGAAGTGATGGGAAGTGTAAGAGCAAGCATGAGGTGCTGGATATATCAGAAGATGATTCTGCTTTGCTCAAGAATGAACCACCTCCACCTTCACCTGATTCAAATTTGGTCACTATTTCAACACCACCAAATGTTGTATAG 1995 0.4381 MANLVMQDDDNAPMTFLFYASIFLVLVASISSQEENKHHECSKPFSCGLLSIYYPFWGGSRPSYCASNHLFKLNCEGNQNSTIQLGSATFQVLHFDPAQYTVKMVRTRLVYDNCSSSAVTNNSVDSNLFSYLNVKNITIYYGCPYSLISNSTRSFPCKEDGHMGAFYGDPATMKVQDCEGPRIEVQVGQELDPAGGIEGLNQALSKGFEVHLISEAQVQHCLECILSNGTCGANDDSQFLCFCPNGSEGLDCSPPHRDKWNWKRKVVIGVGAAVMSAIAVGLGFYIYYGRQKKKNYLHAVTSSVLRNSKGILHSSSLEDSEKGSKYFGVHFFTYGELEEATNFFDPKRELGDGGFGKVYFGKLHDGRLVAVKRMYENSLKIEQFVNEVEILTGLHHQNLVSLYGCTPRHSRELMLVYEYVPNGTVADHLHGQRAKPGTLPWHIRMNIAIETASALVYLHASDIIHRDVKTNNILLDNHFSVKVADFGLSRLFPTHATHISTAPQGTPGYVDPEYHEYYHLTDKSDVYSFGVVLIELVSSMHAVDISRRRHEINLSNMAIKKIQSGALHEIVDPTLGFDSDFKVRKMINAVAELAFQCLQSSKDARPSMAEVLDRLEDIRSDGKCKSKHEVLDISEDDSALLKNEPPPPSPDSNLVTISTPPNVV* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1877 664 ProSiteProfiles Protein kinase domain profile. 344 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1877 664 ProSitePatterns EGF-like domain signature 1. 241 252 IPR000742 -
Pvu2g1877 664 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 19 654 - -
Pvu2g1877 664 Pfam Protein kinase domain 346 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1877 664 Gene3D Phosphorylase Kinase; domain 1 315 419 - -
Pvu2g1877 664 MobiDBLite consensus disorder prediction 635 664 - -
Pvu2g1877 664 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 19 654 IPR044652 -
Pvu2g1877 664 Pfam Wall-associated receptor kinase C-terminal 176 245 IPR032872 -
Pvu2g1877 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Pvu2g1877 664 SUPERFAMILY Protein kinase-like (PK-like) 320 616 IPR011009 -
Pvu2g1877 664 Pfam Wall-associated receptor kinase galacturonan-binding 41 105 IPR025287 GO:0030247
Pvu2g1877 664 Gene3D Transferase(Phosphotransferase) domain 1 420 631 - -
Pvu2g1877 664 SMART serkin_6 344 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1877 664 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1877 Pvu-Chr2 33534747 33537920 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1877 43 663 Receptor kinase-like Gene Family AT1G25390 42.702 8.51e-143 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pvu2g1877 Pkinase 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1877 - - vra:106766190 1145.18