LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu2g1852	ATGGCTTACATAGAGTCCTCTTGCCATGGAACCAGGTACCCTGATCTGTGCATACGTTGTCTAGCCAGATTTTCAAATTCCACCATAGATGGTCCTCAGCACTTGGCCCATCTTGCCCTTTCGGTGAGCCTCTTCAGGGCACTAAAAACTAGGGTTTACTTGTTAAAAGTGGCCAAGGAACTTGAAGAGTTTAAGAGTGATAGAGTGTACCTTACTGTGCAAGATTGTGTGACGCAGCTCAACGATAAGCTCCGCAGGATGAACAAAGGCACCATCATAGATGACAACTTCTTGTGGCATATAAGCAATGTTGAGACATGGGTAAGCACTGCCTTAACAGATGCTAGCTACTGTGTTCAATCCTTCCCTGGAACAAGGATGAGTAAAAGGACAGCTACTATAAAGGTTAAGGCACAAAATGTTGCAGAGGTCACTAGTAATGCACTCAATTTATTTCATAGATATGCTTCTAGTTACCATGTAGCAGCTGGAGCCAGCTTGAAACCCTAA	510	0.4392	MAYIESSCHGTRYPDLCIRCLARFSNSTIDGPQHLAHLALSVSLFRALKTRVYLLKVAKELEEFKSDRVYLTVQDCVTQLNDKLRRMNKGTIIDDNFLWHISNVETWVSTALTDASYCVQSFPGTRMSKRTATIKVKAQNVAEVTSNALNLFHRYASSYHVAAGASLKP*	170

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu2g1852	169	SUPERFAMILY	Plant invertase/pectin methylesterase inhibitor	3	155	IPR035513	-
	Pvu2g1852	169	PANTHER	BNAANNG18590D PROTEIN	2	159	-	-
	Pvu2g1852	169	SMART	PMEI_2	1	151	IPR006501	GO:0004857
	Pvu2g1852	169	TIGRFAM	PME_inhib: pectinesterase inhibitor domain	3	154	IPR006501	GO:0004857
	Pvu2g1852	169	Pfam	Plant invertase/pectin methylesterase inhibitor	3	151	IPR006501	GO:0004857
	Pvu2g1852	169	Gene3D	Invertase/pectin methylesterase inhibitor family protein	1	155	IPR035513	-
	Pvu2g1852	169	PANTHER	PECTINESTERASE INHIBITOR-LIKE	2	159	-	-
	Pvu2g1852	169	CDD	PMEI-like_3	6	157	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu2g1852	Pvu-Chr2	33202250	33202789	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu2g1852	8	158	Carbohydrate Esterase	AT1G53840	25.455	3.14e-08	50.1

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu2g1852	-		-	ccaj:109789012	267.314

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