Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1852 ATGGCTTACATAGAGTCCTCTTGCCATGGAACCAGGTACCCTGATCTGTGCATACGTTGTCTAGCCAGATTTTCAAATTCCACCATAGATGGTCCTCAGCACTTGGCCCATCTTGCCCTTTCGGTGAGCCTCTTCAGGGCACTAAAAACTAGGGTTTACTTGTTAAAAGTGGCCAAGGAACTTGAAGAGTTTAAGAGTGATAGAGTGTACCTTACTGTGCAAGATTGTGTGACGCAGCTCAACGATAAGCTCCGCAGGATGAACAAAGGCACCATCATAGATGACAACTTCTTGTGGCATATAAGCAATGTTGAGACATGGGTAAGCACTGCCTTAACAGATGCTAGCTACTGTGTTCAATCCTTCCCTGGAACAAGGATGAGTAAAAGGACAGCTACTATAAAGGTTAAGGCACAAAATGTTGCAGAGGTCACTAGTAATGCACTCAATTTATTTCATAGATATGCTTCTAGTTACCATGTAGCAGCTGGAGCCAGCTTGAAACCCTAA 510 0.4392 MAYIESSCHGTRYPDLCIRCLARFSNSTIDGPQHLAHLALSVSLFRALKTRVYLLKVAKELEEFKSDRVYLTVQDCVTQLNDKLRRMNKGTIIDDNFLWHISNVETWVSTALTDASYCVQSFPGTRMSKRTATIKVKAQNVAEVTSNALNLFHRYASSYHVAAGASLKP* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1852 169 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 3 155 IPR035513 -
Pvu2g1852 169 PANTHER BNAANNG18590D PROTEIN 2 159 - -
Pvu2g1852 169 SMART PMEI_2 1 151 IPR006501 GO:0004857
Pvu2g1852 169 TIGRFAM PME_inhib: pectinesterase inhibitor domain 3 154 IPR006501 GO:0004857
Pvu2g1852 169 Pfam Plant invertase/pectin methylesterase inhibitor 3 151 IPR006501 GO:0004857
Pvu2g1852 169 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 155 IPR035513 -
Pvu2g1852 169 PANTHER PECTINESTERASE INHIBITOR-LIKE 2 159 - -
Pvu2g1852 169 CDD PMEI-like_3 6 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1852 Pvu-Chr2 33202250 33202789 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1852 8 158 Carbohydrate Esterase AT1G53840 25.455 3.14e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1852 - - ccaj:109789012 267.314