Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1848 ATGGAGGAAAAGAAGGAGATATCGACGCCACCTTCGGAGGATGTTGGTGTTATTGACTTTATGGGAAGCTATGAACTGGGTGAGACCCTGTACGAGGGAAACTACTGTACCATTAAGCATGCAACTCAGGTTGCCACCGGACAAAAGGTTGCCGTCAAAATTATCGACAAAGAAAAGGTTCTCAGAGACAAAAAGAAGAACGTGTTGGACTTGGAACTGATAGAACGAAACGTATCAACAATGAAAACTATTAGACACCCGAATGTGGTGCATATCTATGAGGTGATCTCCACCGAAACACAGTTGTGTCTTATAATGGAACTTGCAACTGATGGGAAACTGTTTGATAAAATTAAAAACACCACGACCGGGAGACTGACAGAGCCCGAAGCAAGAAAATATTTTCAGCAGCTTATATATGCTGTGGCTTTCTGTCACAATAACGGTATCACTCATAGAAACTTAAAGTCAGAGAATCTGTTGCTGGGTGCTGATGGAATGCTTAAAGTATCATATCTTGGACTGAGTGCACTGTCCCAAGAAGTTGGAAATCATGGGATGTATTGTCATGGCAGACCATGCGGTGCACCAAATTATAGGGCCCCAGAGGTGGAAAGCGTTAATGGCTATGATTATGCACGGGCTGACGTATGGGCATGTGGTGTTATTCTGTTTGCAATGTTGACTGGTGATTTACCCTTCAACAATGAGAACATTGGGATTATATATCTGAAGGCATGTGCAGCTGATTTCAGTTGTCCTTCGTTTTTGTCTCCAACTTTAAAGAGACTAATTAGGAGAATCCTTGATCCCAATCCTGCTGCACGGATTACAATTGTTGAGATGTTGAAGGATGAATGGTTCGATAGTAATAATGAGGATGAACTTATTAGTAATGGCACTGATCATGTTGGGACGGGGCAAGATGCGGGGCCTTCAACACATCAAATCAATAATGCATACGATGATTTGCGTACCTCTCCCTCGATCAACTTTGAAGTTGTCAAACGAGTAGTAAATGTACTTGCTCGAAGGAAAAGAGTTTTCAGGACCAGTCTTTGTGGGAGTAAGATAATTTCAAGATTTGAAAAACCTATAGACCGCATGAATCTTCATACGAAGAGGATAGACATGGTGCTTGAAGGGGGATATGGACCCAAATTTGAGTATCTATCTGTAAAAGTTAAGATTACTCCTTCGTTCTACCCTTACCTTTACAGGGTTACGATTCGAAAGAATGGAGGAGATGCTCGGGATTTTGACAAGTTCTACAAAGAACTAATTGATGAAGTGGAAGATATCATTTGGAATGAAGATAATATCCACCTACCAAGTTTAGCGAATTAG 1347 0.4128 MEEKKEISTPPSEDVGVIDFMGSYELGETLYEGNYCTIKHATQVATGQKVAVKIIDKEKVLRDKKKNVLDLELIERNVSTMKTIRHPNVVHIYEVISTETQLCLIMELATDGKLFDKIKNTTTGRLTEPEARKYFQQLIYAVAFCHNNGITHRNLKSENLLLGADGMLKVSYLGLSALSQEVGNHGMYCHGRPCGAPNYRAPEVESVNGYDYARADVWACGVILFAMLTGDLPFNNENIGIIYLKACAADFSCPSFLSPTLKRLIRRILDPNPAARITIVEMLKDEWFDSNNEDELISNGTDHVGTGQDAGPSTHQINNAYDDLRTSPSINFEVVKRVVNVLARRKRVFRTSLCGSKIISRFEKPIDRMNLHTKRIDMVLEGGYGPKFEYLSVKVKITPSFYPYLYRVTIRKNGGDARDFDKFYKELIDEVEDIIWNEDNIHLPSLAN* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1848 448 Pfam Protein kinase domain 24 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1848 448 ProSiteProfiles Protein kinase domain profile. 24 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1848 448 Gene3D Phosphorylase Kinase; domain 1 17 114 - -
Pvu2g1848 448 Gene3D Transferase(Phosphotransferase) domain 1 115 309 - -
Pvu2g1848 448 Gene3D Kinase associated domain 1, KA1 314 437 - -
Pvu2g1848 448 SUPERFAMILY Protein kinase-like (PK-like) 17 295 IPR011009 -
Pvu2g1848 448 PANTHER CBL-INTERACTING PROTEIN KINASE 32 19 440 - -
Pvu2g1848 448 PANTHER SERINE/THREONINE KINASE 19 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1848 Pvu-Chr2 33146833 33149730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1848 21 439 CBL-interacting serine-threonine protein kinases AT1G01140 40.950 9.88e-109 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pvu2g1848 Pkinase 1.3e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1848 - - pvu:PHAVU_002G179600g 642.499