Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1836 ATGGGTAAGGTCTTGGGCAGAGGAAACTGCTCACTCGTGAGGCTTGCACGTAACATTGTCACCGGAGACAAGGTAGCCATCAAAATTTTTGACAAAGAACAACTTCTCAAAAAGAAAAGGATCAAGAGGCTTATTAAGAAAAAGATTAAACAAGAAATATCAATACAGAGCATGGTTAAGCACCCGAATGTGGTGCCTATAATTGAGGTTATGGCTACCAAGAAAAATATATACATCGTAATGGAGCATTTAGCCCAAGGGGAACTGTTTGATAAAATTAGTAAGAGAACCCTCATGGGAATGAGTGAACTTCAAGCAAAGAATTATTTTCACCAGCTTATACGTGCTTTGGATTACTGTCATAGTAAAGGTGTTTTCCATAGAGACATAAAGCCGGAGAATTTGTTGGTGGGTGATGATGGAGTGCTCAAGTTATCAGATTTTGGATTGAGTGAACTATTCCCAGCTGACGGAAATAAGCTTTTTTGTGTCCCTTATGGCACCCCACAATATACCGCCCCAGAGGTGACAAGATCCTACGGCTATGAGGGTCCAAAGGCTGATATTTGGGCATCTGGTATTACACTTTTCTTTATGGTTTGTGGTCATTTGCCCTTCACCAGTGATAACCAGCATGATTTACATAAAAAGATTTGTGCTGCAAACTACACCATCCCTTATTTTTTTTCTAATGATTTAAAGAGATTGATTAGGAGAATGCTTGATGCCAATCCTGCTACACGGATCACAATTGATGAAATTTTTCAGGATGAGTGGTTCATGAGGAATTATCAACCTCTTACATTTCCCCGGGAAAATTTTAGTTTTGATAATGTAAGTGCTAGTTTCAGTGGAATAGCTGATTCACGAATTCTTCCAGTGGAGGGCGAAGAATTAGAGTCTTCAGCAGCACCACAAGCCATGAATGCGTTTGAGATGTTTTCTACCTGTCTCGGCTTCAACCTTATAGGGAATCTTTTCAGTGAGGTACATGTTAAGTGGGAAATTAGATTCATATCCAAATCTCCCGTCCTTGATATAATTGGAGAAATTGAGTATAAAACATCCAGATTAGGATTTGATGTTAAGAGGAGGAACTTTCAGATGAGTATTACTCATAAAGAGGAACTGGCTAGACGCAAAGGTCACCTATCTATAGTCATTAAGATCTATGAGATGGTCCCTTCCATTTACATGGTTGAGGTTCGTAATGCTTCAGGAGATAATCTACAATTCCATGAGTTCTGCAAGCAAGTATTTGCTGAGCTGCAAAATATCCTTTGGAAAAACTCCATCATGAGTACAGAAGAAGAATCCCCTTAG 1323 0.393 MGKVLGRGNCSLVRLARNIVTGDKVAIKIFDKEQLLKKKRIKRLIKKKIKQEISIQSMVKHPNVVPIIEVMATKKNIYIVMEHLAQGELFDKISKRTLMGMSELQAKNYFHQLIRALDYCHSKGVFHRDIKPENLLVGDDGVLKLSDFGLSELFPADGNKLFCVPYGTPQYTAPEVTRSYGYEGPKADIWASGITLFFMVCGHLPFTSDNQHDLHKKICAANYTIPYFFSNDLKRLIRRMLDANPATRITIDEIFQDEWFMRNYQPLTFPRENFSFDNVSASFSGIADSRILPVEGEELESSAAPQAMNAFEMFSTCLGFNLIGNLFSEVHVKWEIRFISKSPVLDIIGEIEYKTSRLGFDVKRRNFQMSITHKEELARRKGHLSIVIKIYEMVPSIYMVEVRNASGDNLQFHEFCKQVFAELQNILWKNSIMSTEEESP* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1836 440 SMART serkin_6 1 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1836 440 Gene3D Kinase associated domain 1, KA1 304 429 - -
Pvu2g1836 440 CDD STKc_AMPK-like 1 259 - -
Pvu2g1836 440 Pfam NAF domain 305 363 IPR004041 GO:0007165
Pvu2g1836 440 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 23 1 433 - -
Pvu2g1836 440 Gene3D Transferase(Phosphotransferase) domain 1 1 303 - -
Pvu2g1836 440 ProSiteProfiles Protein kinase domain profile. 1 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1836 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Pvu2g1836 440 Pfam Protein kinase domain 3 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1836 440 CDD CIPK_C 309 418 - -
Pvu2g1836 440 PANTHER SERINE/THREONINE KINASE 1 433 - -
Pvu2g1836 440 SUPERFAMILY Protein kinase-like (PK-like) 2 282 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1836 Pvu-Chr2 33059661 33063388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1836 1 438 CBL-interacting serine-threonine protein kinases AT1G01140 42.316 2.99e-123 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pvu2g1836 Pkinase 4.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1836 - - pvu:PHAVU_002G178400g 857.44