Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1808 ATGGCGGCTGGGAGACATGGCGGTTACCGCGAAAACGAGTTCAGAGAGCGCGAATCGAAACTCGAAGGTTCTAGACGCGGGTTCGCCAATTCGAAAGAGGATTACGATCGTGTTAGGAATGGTGGCGGTGATGTTGTGAGGGGTGGGTCCAGGGACAGGGTTAGGGTGAGGCAGAGGGATATTAAGGAGAGGGAAGGTGTTAATGGTGGTTACCGATCATCTTCGAGTAGGAGTGACTCTGGTAGTAGTGGCCTTGGTCCTCGCCGGTGTGGTTTCTCTGTCAAGGCAATGGATAGAGAGCCTGGTGAGCTTTCCAGTGAGAGTGGGTCTGATGATGCTATTGAATCAGAATCGGGTGCGAAAGACTCCGAGGTTGCCATGTTGGAAGAAAAAAGAACCCGATCTCCACCGGTGCCGGAGAGGAAAAGAAAATTCTCGCCCATTGTGTGGGATCAGGATGACAAAGATGTCAGTGAGTCATCCAAAGTTAGGGTTTCTGCCTCTACAGTGGTGACAGCAGCTCTTCCTCCTCCTCCTCCATTGCCAAAGGCGTTCCTCCATCAGTCACAGTCACAGTCACCAAATGCTGCAAATGGTGGGGTTGAAATACATCCTGTCAATAACAAGGAGACCGAGGATCTCCAGATGAATGCAGCATCTAAGATTACCCTGCCCTCTCCTTCAGGTTTGCATTCATCACCTCCGAAAGGGAGGTGGGGTAATGATCAGGAGGAAGCTGAGCATTTAGAAGGTGAAGTTTATGTTCCAGCTCGCAATATATCGTCTTCAAGATGGGCAGCTGGAGATAACTCTCCTGGTGATGAGGGTGAGATCCTCAATGATGAGGAAATGCCCAAACGGAGGAGGAAGGTGTCTCCTGAGTTCTTGGATGGCAGACTAAGGAACAAGTTATTGAGCCCTGTGGAATCCAAGATAGAAGGGATTGAAGGAGCTAGAGCCAGATCATCTGAATCTGAAGAAAGAGGTGTCCGTGGGAGAACCTCCAGCAGTGATGATCATCCTGGTATCGAGTCAGAGAAGGATGACTTCATGGAGGTTGATCCTCAAGGTGGGAAAAGTGAAACCAGTGTCAGTCACTCGGACACGGAATATGAAGATGAAGATGATGGTCGGGAGACTCCGGAACCTCTTTCTCCACCTCAAAGAACTGTCAACATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTTAACAAGATAGATGAAGGAACATATGGTGTTGTATATAGGGCTAGGGATAAAAAGACTGGAGAAATTGTAGCATTGAAGAAGGTCAAGATGGAGAAGGAAAAAGAGGGCTTCCCACTGACTTCTCTTAGGGAAATAAACATTCTTCTTTCTTTTCACCACCCATCCATAGTTGATGTTAAAGAAGTAGTGGTAGGAAGTAGCCTTGATAGCATTTTCATGGTCATGGAATATATGGAGCATGACCTTAAAGGACTAATGGAAGCAATGAAGCAACCTTTCAGCCAGAGTGAAGTGAAGTGCTTGATGATCCAGCTTTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCATAGGGATTTAAAGACATCAAATCTGCTTCTAAATAATAGAGGTGAGCTCAAAATTTGTGATTTTGGCTTGGCTCGTCAGTATGGGAGTCCTTTAAAGCCATATACACACCTGGTGGTTACTCTTTGGTACAGGGCACCTGAACTTCTTCTGGGATCAAAACAGTATTCAACAGCCATAGACATGTGGTCTCTAGGTTGTATAATGGCTGAGCTATTATCTAAGGAACCACTGTTTAATGGGAGAACGGAGTTTGATCAACTTGACAAGATTTTTCGGATTCTAGGCACCCCTAATGAAGCAATTTGGCCTGGTTTCTCGAAATTACCTGGAGTCAAGGTCAATTTTGTCAAACACCAGTACAACCTCCTGCGTAAAAAGTTTCCTGCCACATCATTCACGGGATCTCCTGTTCTTTCTGACTCAGGATTTGATCTGTTGAACAAGCTTCTAACATATGACCCCGAAAAGAGGATCACTGCCGAAGCTGCTCTAAATCATGAGTGGTTCCGTGAGGTTCCTCTTCCCAAAAGTAAAGAATTCATGCCTACATTTCCTGCTCAACACGCTCAGGACAGGCGTGTGCGGAGAATATACAAGAGTCCAGATCCTTTAGAAGAGCAGCGCAGGAAGGAGTTGCAGCAGGGTGAATCAGGGACTGGTGGAATTTTTGGCTAA 2250 0.4636 MAAGRHGGYRENEFRERESKLEGSRRGFANSKEDYDRVRNGGGDVVRGGSRDRVRVRQRDIKEREGVNGGYRSSSSRSDSGSSGLGPRRCGFSVKAMDREPGELSSESGSDDAIESESGAKDSEVAMLEEKRTRSPPVPERKRKFSPIVWDQDDKDVSESSKVRVSASTVVTAALPPPPPLPKAFLHQSQSQSPNAANGGVEIHPVNNKETEDLQMNAASKITLPSPSGLHSSPPKGRWGNDQEEAEHLEGEVYVPARNISSSRWAAGDNSPGDEGEILNDEEMPKRRRKVSPEFLDGRLRNKLLSPVESKIEGIEGARARSSESEERGVRGRTSSSDDHPGIESEKDDFMEVDPQGGKSETSVSHSDTEYEDEDDGRETPEPLSPPQRTVNMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMIQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGRTEFDQLDKIFRILGTPNEAIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEAALNHEWFREVPLPKSKEFMPTFPAQHAQDRRVRRIYKSPDPLEEQRRKELQQGESGTGGIFG* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1808 749 MobiDBLite consensus disorder prediction 724 738 - -
Pvu2g1808 749 Gene3D Transferase(Phosphotransferase) domain 1 486 725 - -
Pvu2g1808 749 ProSiteProfiles Protein kinase domain profile. 403 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1808 749 MobiDBLite consensus disorder prediction 210 230 - -
Pvu2g1808 749 SUPERFAMILY Protein kinase-like (PK-like) 395 700 IPR011009 -
Pvu2g1808 749 MobiDBLite consensus disorder prediction 238 252 - -
Pvu2g1808 749 CDD STKc_CDC2L1 397 694 IPR045267 GO:0004674|GO:0005524|GO:0006468
Pvu2g1808 749 SMART serkin_6 403 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1808 749 Gene3D Phosphorylase Kinase; domain 1 388 485 - -
Pvu2g1808 749 MobiDBLite consensus disorder prediction 8 67 - -
Pvu2g1808 749 MobiDBLite consensus disorder prediction 69 83 - -
Pvu2g1808 749 ProSitePatterns Serine/Threonine protein kinases active-site signature. 523 535 IPR008271 GO:0004672|GO:0006468
Pvu2g1808 749 Pfam Protein kinase domain 403 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1808 749 PANTHER - 152 749 - -
Pvu2g1808 749 MobiDBLite consensus disorder prediction 314 355 - -
Pvu2g1808 749 PANTHER CELL DIVISION PROTEIN KINASE 152 749 - -
Pvu2g1808 749 MobiDBLite consensus disorder prediction 114 161 - -
Pvu2g1808 749 MobiDBLite consensus disorder prediction 1 390 - -
Pvu2g1808 749 MobiDBLite consensus disorder prediction 724 749 - -
Pvu2g1808 749 MobiDBLite consensus disorder prediction 279 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1808 Pvu-Chr2 32639903 32647470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1808 394 739 Core Cell Cycle Gene Families AT5G10270 44.751 6.26e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Pvu2g1808 Pkinase 2e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1808 K08818 - gmx:100792524 1265.75