Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1789 ATGAAACCTACGCCAACATCCTTCTCCTGCCAAACCTCGTTATTGGTTTCTCTTGCCCTAGTGCTTGCCCTTGCACTAACAACAACAACAACCAAGTTCCAATTCCAGAATACCCTCTCCTTTTCCCCACTCGCCACTCTCTTTGTTGCCCTCTTCACTATTTCCCTTAACTACTGGCTTGTCCCTGGAGGTTTTGCATGGAGAAACTATCCAGTCCAACATCATCACAACAACGAAAAACCAAATGCAAAACTTTCTGGGCCTATGGGCTGGCCCATACTGGGCTCTCTGCCTCTAATGGGCTCTCTGGCGCACGCCAAACTCGCTGCTTTAGCCGCGTCGTTAAACGCCAAGAGGTTAATGGCGCTCAGCCTGGGACCCACTCCGGTTGTTATAAGCAGCCACCCCGAGACTGCGAGACAAATCTTATTCGGATCCTCGTTTTCGGATCGTCCCATAAAAGAATCCGCGCGCGCTCTCATGTTTGAGCGTGCCATTGGTTTCGCTCCTTCCGGCACCTACTGGAGGCACCTACGCAGGATTGCGGCGTTCAACATGTTCTCTCCGAGGAGGATTCAGGGTTTGGAGGGTGTCCGGCAGCGGGTGGCAGATGACATGGTGAAGAGCGCGTGGAAGGAGATGGAGCAGAAAGGGGTGGTGGACGTTCGGGGCGTGTTTCAGGAAGGATCTCTGTGCAATATTTTGGAGAGTGTGTTTGGGAATAATGATAAGAGTGAGGAGTTGGGTGATATGGTTAAGGAGGGGTATGAGTTGATTGCGAAGTTCAACTTGGAAGATTATTTTCCTCTCAAGTTTTTGGACTTTCATGGGGTGAAGAGAAGGTGCCACAAGTTGGCGGCTAAGGTTGGTAGTGTGGTTGGGGAAATTGTGGAGGAGCGAAAACGAGATGGGAGTTTTGTTGGGAAGAATGATTTTCTTAGCACTTTGTTATCCTTACCAAAAGAAGAAAGGTTGGATGATTCAGATATGGTGGCTATTCTGTGGGAAATGGTATTTCGAGGAACAGACACAGTTGCAATACTCCTAGAATGGGTGATGGCCAGAATGGTTTTACACCAAGACGTACAAAAGAAAGCCCGCGAAGAAATCGACACGTGCATCAGCCAAAAGAGTCACGTGCGAGACTCGGATATTGCGAACCTGCCTTACCTACAGGCCATAGTGAAAGAAGTTCTTCGGCTGCACCCACCGGGTCCACTACTATCATGGGCCCGCCTCGCAGTCCAAGATGTCCACGTCGATAAAGTACTTGTGCCAGCTGGCACAACAGCCATGGTTAACATGTGGGCAATATCTCATGACTCGTCCATCTGGGAAGACCCATGGGCTTTCAAGCCCGAGAGGTTCCTCAAAGAAGACGTTTCTATCATGGGGTCGGACTTGAGGCTCGCCCCCTTCGGGGCTGGACGTAGGGTGTGTCCGGGCCGGGCCTTGGGCTTGGGCACGGCCCATCTCTGGCTCGCGCAACTTCTCCGCCACTTCATATGGGTCCCGGCGCAACAAGTGGATCTTTCGGAATGCCTTAAGCTTTCGATGGAAATGAAGACACCTCTGCGATGCGTACTGGTTCGTAGATGA 1599 0.5116 MKPTPTSFSCQTSLLVSLALVLALALTTTTTKFQFQNTLSFSPLATLFVALFTISLNYWLVPGGFAWRNYPVQHHHNNEKPNAKLSGPMGWPILGSLPLMGSLAHAKLAALAASLNAKRLMALSLGPTPVVISSHPETARQILFGSSFSDRPIKESARALMFERAIGFAPSGTYWRHLRRIAAFNMFSPRRIQGLEGVRQRVADDMVKSAWKEMEQKGVVDVRGVFQEGSLCNILESVFGNNDKSEELGDMVKEGYELIAKFNLEDYFPLKFLDFHGVKRRCHKLAAKVGSVVGEIVEERKRDGSFVGKNDFLSTLLSLPKEERLDDSDMVAILWEMVFRGTDTVAILLEWVMARMVLHQDVQKKAREEIDTCISQKSHVRDSDIANLPYLQAIVKEVLRLHPPGPLLSWARLAVQDVHVDKVLVPAGTTAMVNMWAISHDSSIWEDPWAFKPERFLKEDVSIMGSDLRLAPFGAGRRVCPGRALGLGTAHLWLAQLLRHFIWVPAQQVDLSECLKLSMEMKTPLRCVLVRR* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1789 532 PANTHER CYTOCHROME P450 78A7-RELATED 24 532 - -
Pvu2g1789 532 Pfam Cytochrome P450 87 517 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1789 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506|GO:0016705
Pvu2g1789 532 SUPERFAMILY Cytochrome P450 87 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1789 532 PRINTS E-class P450 group I signature 114 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1789 532 PRINTS E-class P450 group I signature 329 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1789 532 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1789 532 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1789 532 PRINTS E-class P450 group I signature 434 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1789 532 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1789 532 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1789 532 PRINTS P450 superfamily signature 340 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1789 532 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1789 532 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1789 532 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 24 532 - -
Pvu2g1789 532 Gene3D Cytochrome P450 71 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1789 Pvu-Chr2 32357057 32359387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1789 33 532 Cytochrome P450 AT1G13710 52.519 2.16e-175 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1789 - - gmx:100817944 894.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2698 1 51618070 51619993 Pvu2g1789 2 32357057 32359387 PCT