Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1773 ACGCAGTTCATGCTGGATCAGCTCTCTGATCTTCAGCGTAAGGAACACTTGCTAAGTGAGGCTAACAGGTCTCTCAGACAAAGGCAGTTGGAAGGGTATCAAATAAATCCACTCCAACTGAATCCTGGAGTTGAAGACATGGGATATGGCAGGCATCCAGGTCAAGGTCAGGGTGACGCACTCTTTCAACCATTGGAGTGTGAGCCAACGTTACAAATTGGGTATCAGCCTGATCCAGTATCAGTGGTGACAGCAGGTCCAAGCATGAGCAATTACATGGCAGGATGGTTACCATAG 297 0.4815 TQFMLDQLSDLQRKEHLLSEANRSLRQRQLEGYQINPLQLNPGVEDMGYGRHPGQGQGDALFQPLECEPTLQIGYQPDPVSVVTAGPSMSNYMAGWLP* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1773 98 PANTHER MADS BOX PROTEIN 1 84 - -
Pvu2g1773 98 Coils Coil 8 28 - -
Pvu2g1773 98 PANTHER DEVELOPMENTAL PROTEIN SEPALLATA 2 1 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1773 Pvu-Chr2 32036897 32038105 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1773 1 98 MADS-box Gene Family AT1G24260 53.465 1.03e-19 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1773 - - pvu:PHAVU_002G1723000 199.904
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1773 2 32036897 32038105 Pvu2g1773 2 32036897 32038105 ECH
Pvu1g2718 1 51735651 51740810 Pvu2g1773 2 32036897 32038105 PCT