Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1765 ATGGAAGAGAGAAATGATAATGGTGAGAAACTGGATGAGGTTATGCTACCGGGTTTCAGGTTTCATCCAACAGACGAGGAGCTTGTTGGATTTTACCTTAAGAGAAAGATTCAGCAGAGTCCTCTTTCTATTGAGCTCATCAAGCAGCTTGATATCTATAAGTATGATCCTTGGGATCTTCCAAAGTTGGCCACCACTGGGGAGAAAGAGTGGTATTTCTACTGTCCAAGAGACAGAAAGTACAGGAACAGTGCAAGGCCTAATAGGGTAACTGGAGCTGGGTTCTGGAAGGCTACAGGGACGGATCGCCCTATATATTCCTCGGAGGGTTCCAAGTGTATTGGTCTGAAGAAGTCCCTTGTGTTCTACAAAGGTAGAGCTGCCAAAGGGATTAAAACTGATTGGATGATGCATGAGTTTAGACTACCTTCTCTCACTAACCCATCCTCATCCCCTAAGAAGTTCATGGACAAGACCATTCCTGCTAACGAATCCTGGGCAATCTGCAGAATCTTCAAGAAAACCAATGCTACAGCACAAAGAGCTCTCTCTCACTCTTGGGTCTCACCCTTGCCTGAAACCACCACTTCAGATCATATGTTAGGCACTGATAGATATGGCAACCAATTTTCTACAGCAAACATGCTATTTCCAAAGAAAACTAGCTTAGCCAGCCAGTTTTGTACTTTTAATCACAATGACACACAACACTCAACCACTACTACTAGCACCCCTTGTCCTATAGATATTCTATCTTCTTATAACAAACCAATTATTAATCCATTAATGCTTTACAAGCCCTTAGATCTGTTACCCATTTCAAATGGAGACCTTAGCACTGGTTTAATATTCTCATGTCCTCTTGAAACTTCAACAAACAGTGCTAAATCTTCGATGGATGTCTCTTCATTGCTAATGAGTACCTCAACTTCAGTGCTTGGGGAATTTAATAGTAAGACCTCTGAGGGATTGAGCACAAACTTTGGTGGGTTACAGGAGCATGGCTACCAAATACCACTACTACGTGAAATGCAAGGGAGCTTTGGCAACCACGATGACAACGTATTTATAAAGATTCCTAATGTGGATGTGGCTCATGTTGGTGAGCAACAATCGGAGACAGTGCGATCCACTGGGTTTCCAATCAGTATTGGCGATGCATGGAAGCCAAATGTGCTTTGGGATAGTTCATCTTTGTCCTTGTGA 1206 0.427 MEERNDNGEKLDEVMLPGFRFHPTDEELVGFYLKRKIQQSPLSIELIKQLDIYKYDPWDLPKLATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRLPSLTNPSSSPKKFMDKTIPANESWAICRIFKKTNATAQRALSHSWVSPLPETTTSDHMLGTDRYGNQFSTANMLFPKKTSLASQFCTFNHNDTQHSTTTTSTPCPIDILSSYNKPIINPLMLYKPLDLLPISNGDLSTGLIFSCPLETSTNSAKSSMDVSSLLMSTSTSVLGEFNSKTSEGLSTNFGGLQEHGYQIPLLREMQGSFGNHDDNVFIKIPNVDVAHVGEQQSETVRSTGFPISIGDAWKPNVLWDSSSLSL* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1765 401 Pfam No apical meristem (NAM) protein 17 142 IPR003441 GO:0003677|GO:0006355
Pvu2g1765 401 ProSiteProfiles NAC domain profile. 15 174 IPR003441 GO:0003677|GO:0006355
Pvu2g1765 401 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 399 - -
Pvu2g1765 401 PANTHER PROTEIN FEZ ISOFORM X1 1 399 - -
Pvu2g1765 401 Gene3D NAC domain 24 179 IPR036093 GO:0003677|GO:0006355
Pvu2g1765 401 SUPERFAMILY NAC domain 14 174 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1765 Pvu-Chr2 31796895 31798362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1765 1 318 NAC Transcription Factor Family AT1G26870 59.215 1.57e-116 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu2g1765 NAM 1.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1765 - - vun:114179488 699.893