Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1763 ATGAGACAGCTACCGTCTTCATCATCATCTTCTTCTTCCACTTGTGAATGGACCCATGATGTGTTCCTCAGTTTCAGAGGCGATGACACTCGAAGTGGCTTCACTGGCAACCTACACAAGTCTCTTTGTGACAGGGGAATTCACACCTTCATAGATGATGAGGGGCTCAGAAAAGGGGAAGAGATTAGACCTGCTCTTTTCAAGGCTATTGAGCAGTCTAGAATTGCCATTGTTGTTTTCTCTGAAAATTATGCTGAGTCAACTTATTGTCTTGAAGAACTTGCCATGATCCTTGAGTGCATAGTGAAAAAGGGTCGACTTCTTTGGCCAGTGTTTTACGGGGTTACCCCATCTTATGTGCGGTTTCAGAAGGGTTCTTATGGGAAAGCATTGGCCAAGCTTGGAGAAAGATTCAAGAATGACCAGGAGAAGCTGCAAAAATGGAAGCTAGCTCTACAAGAAGCTGCTGATTTGTCTGGTTGCCATTTCAAACTCAAACAAGGGTATGAACATGAACTTATTGGGACAATTGTTGAAGAGGTTTCCAAAAGAATAAATCGTAGCCCTTTACATGTGGCTAATTATCCAATTGGACTGAAGTCTAGAGTACAAGACGTGAACTCACTTTTGGATGTTGGATCTAATGGAGGAGTAAGCATGGTTGGGATTTACGGAATCGGGGGAATAGGTAAGACTGCAATCGCATGTGCAGTGTACAATGTCATTGCTGATCAATTTGAAGGTCAGTGTTTCCTTGGTGATATTAGACAAAAATCAATGAAGTATGACTTAGTACAACTTCAGGAGATAATACTTTCTGAAATGGTTGGGGAGAAGAGTATCAAGTTGGGGAGTATTAATAGGGGAATGTCAGTATTGAAAAGCAAGCTTCAAAGAAAGAAAGTTCTTTTGATTCTTGATGATGTTGATAAATTGGAGCAGTTAAAGGCACTTGCTGGTGATCTTTCCTGGTTTGGTGATGGCAGCAAAATCATTGTCACAACAAGGAATAGACATTTTTTACGTGTACATGGTGTTGAAAGAACATATGAAGCAAAAGGATTAGATGATAAAGAAGCACTTGAGTTGTTTAGTTGGCATGCTTTTAAAAGCAATGAAGTTGGTCCAGGTTACTTGGATATCTCCAAGCGTGCAGTATTTTATTCCAATGGCCTTCCATTGGCCTTGGAAATAATAGGTTCTAACTTGAATGGTATAACAATGTCTGAATGGGAAGCAGCATTAGATACCATTGAAAGAATCCCAGATGAAGATATTCAGGAAAAACTAAAAGTAAGCTATGATGGTTTGAAGGGAAATGAGAAGGATGTTTTCCTTGACATTGCTTGTTTCTTAAGAGGCTACCATTTGAAAGATGTCATAAGTTTATTGCTCCAAAGTCGTGGTTTCTCACCTGAGTATGTTATTCGCATGTTGGTAGATAAATCTCTTATAAAGATCGATCAATATGGTTTTGTGCTAATGCATAACTTGGTAGAGGACATGGGCAGAGAAATTGTTAGGCAAGAATCACCATCAGAACCTGGAAAACGCAGTAGATTATGGTTTTATGAGGATATTGTTGATGTTTTAGAAAATGACAAGGGAACTGATACAATTGAAGTAATCATGCTACACTTGCCAAAGAACAGGGAAGTTCTATGGAATGGAATTGAGCTCAAGAAGATGACAAACTTAAAAATGCTAAGTATTGAAAATGCTGACTTTTCTAGAGGCCCTGAATTTCTCCCAAGTAGTTTGAGAGTACTAAAGTGGCGGGGATATCCTACACAGTCTTTGCCACCTGAATATGATCCAAGGAGACTTGTTATGTTAGACTTGTCTCTGAGTCGCAGTATATTGTGCAAACAACTCAACCTGATGAAGTTCGAGTCTCTGAGTGAAATGGTTTTAAGAGGATGCAGATTCATAAAACAGGTACCTGACATGTCTGGAGCCAAAAATTTAAGAAAGCTGTGTCTTGATAACTGCAAGAATTTAGTGGAAGTTCATAATTCCATCGGACTTCTTGACAAACTAAAATGGTTCACTGCTATTGGATGCACCAGTCTAAGGACTTTTCCCCATAGCTTCAAGTTAACATCACTTGAATATCTGTCTCTCAGAAAATGCTCAAGCCTCCAGCGTTTGCCATACATATTAGAAGAAATGAAACATATGAAAAATCTTGACCTGTGTGGAACTAATATTGAAGAATTGCCATATTCGTTTAGGAAACTCACTGGGCTTAAATATTTAGTACTAGACAAGTGCAAGAGGCTTAATCAGATCCCAATAAGTATTTTGATGTTACCAAAACTTGAGAGATTGACAGCTGTAAAATGTGGACGATATGTAAATTTGATCCTTGGTAAAAGTGAAGGACAAGGAAGATTTGTTTCATCTGAGTCTTTGAGAGATTTTAGATTAAACTACAATGATTTGACACCCACCACCAGCTTCCCCAATGTAGAATTCTTAGTCCTAACTGGCTGTGCTTTCAAAGTCCTTCCCGAATGCATCAGTCAATGTCGCTTTCTAAAGAATCTAGTTTTGGACAACTGCAAGGAGCTTCAAGAAATCAGAGGGGTTCCTCCAAAGATAAAATATCTGTCGGCAATAAATTGCACATTATTGTCCCGTGAGTCTCGAAACATGTTGAATCAGAGATTACATGAGGGTGGGGGCACAGATTTTTCCCTTCCAGGAACAAGGTTACCAGAATGGTTTGATCATTGTACTAGGGGGCCATCTCTGTCTTTCTGGTTTCGTAACAAATTTCCAAGGATGGCTCTAGCTGTTGTTGGAGTTTTAGACAAGCAAGGCAGTTTTCCCATGTCCAGATTCCACCTGCTCATCAATGGCATTCAAAAGCTGCATTGCCATTTCACTGTGCAATCAAAATTAATCGCATATCATATATTCTTGTCCGATGTGCAGCTCAAGTCCTACAATGGTGGATTGGAAAGTGTGTATGGGGAGGATGGGTGGAACCATCTTGAGGTTTCATACGTGGGACCAAGAGCCTTTCCACATTCATGCAGAACCAAGAAAGGAACCATTAAGTGGATGGGAGTTCATGTTTACAAGAATAAAACAAACATGCAGGATATCCGGTTCATAAATCCTTGGTGTCCAAAAAGAGCTTTTAGTGAACTTTCCAAGCCTGATTTGGAAGAAAGTTTTCAGTCATTGCCCAAAAGAATCCGTGTATCACAACGCAAGGAAATTTGTGAGGCACCACGTACGAAGCAGCATCAAGCTAAGCGTGGTTATCATGGTGTATCACAGAGGCTATGGTTGGCAATTTGTAGCATTGTAGCTCCTCCAGATGTTAAAGTCCTGATGTGGAATATTTGCCGAGATGATTTGCCAACTTTTGAATACCTTTTCAGGAGAAAGCTTGTAATTAGTCCACTCTGCCCCATTTGTGGAACGGAGCCTGAAACAGTTGAACATGTGTTCCTGTTTTGTCCATGGACACGACCCCTTTGGTTCGGAAGTGATTTCCAGTGGCGCGTTGATGTTAAAGAAGTTCAAAGCTTTCAACTTTGGCTTTGGCATAAACTGATGGAGATTCAAAGGGTATATCCAGAAAATGCCAACCAAATATCTGCTCAGGTAGGAAGTATTTGTTGGTCTATCTGGAAAGGAAGGAATGAATTTGTTCTTGAAGGCAAACCTGTCGATCCTTTGATTTTAAGGTAG 3708 0.3999 MRQLPSSSSSSSSTCEWTHDVFLSFRGDDTRSGFTGNLHKSLCDRGIHTFIDDEGLRKGEEIRPALFKAIEQSRIAIVVFSENYAESTYCLEELAMILECIVKKGRLLWPVFYGVTPSYVRFQKGSYGKALAKLGERFKNDQEKLQKWKLALQEAADLSGCHFKLKQGYEHELIGTIVEEVSKRINRSPLHVANYPIGLKSRVQDVNSLLDVGSNGGVSMVGIYGIGGIGKTAIACAVYNVIADQFEGQCFLGDIRQKSMKYDLVQLQEIILSEMVGEKSIKLGSINRGMSVLKSKLQRKKVLLILDDVDKLEQLKALAGDLSWFGDGSKIIVTTRNRHFLRVHGVERTYEAKGLDDKEALELFSWHAFKSNEVGPGYLDISKRAVFYSNGLPLALEIIGSNLNGITMSEWEAALDTIERIPDEDIQEKLKVSYDGLKGNEKDVFLDIACFLRGYHLKDVISLLLQSRGFSPEYVIRMLVDKSLIKIDQYGFVLMHNLVEDMGREIVRQESPSEPGKRSRLWFYEDIVDVLENDKGTDTIEVIMLHLPKNREVLWNGIELKKMTNLKMLSIENADFSRGPEFLPSSLRVLKWRGYPTQSLPPEYDPRRLVMLDLSLSRSILCKQLNLMKFESLSEMVLRGCRFIKQVPDMSGAKNLRKLCLDNCKNLVEVHNSIGLLDKLKWFTAIGCTSLRTFPHSFKLTSLEYLSLRKCSSLQRLPYILEEMKHMKNLDLCGTNIEELPYSFRKLTGLKYLVLDKCKRLNQIPISILMLPKLERLTAVKCGRYVNLILGKSEGQGRFVSSESLRDFRLNYNDLTPTTSFPNVEFLVLTGCAFKVLPECISQCRFLKNLVLDNCKELQEIRGVPPKIKYLSAINCTLLSRESRNMLNQRLHEGGGTDFSLPGTRLPEWFDHCTRGPSLSFWFRNKFPRMALAVVGVLDKQGSFPMSRFHLLINGIQKLHCHFTVQSKLIAYHIFLSDVQLKSYNGGLESVYGEDGWNHLEVSYVGPRAFPHSCRTKKGTIKWMGVHVYKNKTNMQDIRFINPWCPKRAFSELSKPDLEESFQSLPKRIRVSQRKEICEAPRTKQHQAKRGYHGVSQRLWLAICSIVAPPDVKVLMWNICRDDLPTFEYLFRRKLVISPLCPICGTEPETVEHVFLFCPWTRPLWFGSDFQWRVDVKEVQSFQLWLWHKLMEIQRVYPENANQISAQVGSICWSIWKGRNEFVLEGKPVDPLILR* 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1763 1235 Gene3D - 185 347 IPR027417 -
Pvu2g1763 1235 Pfam NB-ARC domain 203 430 IPR002182 GO:0043531
Pvu2g1763 1235 Gene3D - 11 184 IPR035897 -
Pvu2g1763 1235 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 160 IPR035897 -
Pvu2g1763 1235 Pfam TIR domain 19 186 IPR000157 GO:0007165
Pvu2g1763 1235 Gene3D Ribonuclease Inhibitor 722 915 IPR032675 -
Pvu2g1763 1235 Gene3D Ribonuclease Inhibitor 550 721 IPR032675 -
Pvu2g1763 1235 PANTHER ARCHAEAL ATPASE 29 1003 - -
Pvu2g1763 1235 Pfam zinc-binding in reverse transcriptase 1102 1165 IPR026960 -
Pvu2g1763 1235 PRINTS Disease resistance protein signature 220 235 - -
Pvu2g1763 1235 PRINTS Disease resistance protein signature 296 310 - -
Pvu2g1763 1235 PRINTS Disease resistance protein signature 389 403 - -
Pvu2g1763 1235 PRINTS Disease resistance protein signature 698 714 - -
Pvu2g1763 1235 SUPERFAMILY L domain-like 511 883 - -
Pvu2g1763 1235 SMART till_3 18 158 IPR000157 GO:0007165
Pvu2g1763 1235 Gene3D - 354 438 IPR042197 -
Pvu2g1763 1235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 448 IPR027417 -
Pvu2g1763 1235 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 1003 IPR044974 GO:0006952
Pvu2g1763 1235 ProSiteProfiles TIR domain profile. 17 185 IPR000157 GO:0007165
Pvu2g1763 1235 SUPERFAMILY "Winged helix" DNA-binding domain 425 532 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1763 Pvu-Chr2 31786738 31791350 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1763 19 782 WRKY Transcription Factor Family AT4G12020 33.672 7.48e-91 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1763 - - var:108319971 2271.12