Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1756 ATGGATCTGCAAAATGTGCAAACTCAAAGCATGCGTTTGGTTCTGTCTACTGATGCCAAGCCTAGGCTGAAATGGACTCCTGAGCTTCACCAACGGTTCACTGAGGCTATTAATCAACTTGGAGGTGCAGAAAAGGCAACTCCAAAGAGCCTTATGAGAGTGATGGGGATTCCAGGACTCACTTTGTACCACCTCAAGAGCCATTTACAGAAATATAGGCTTGGGAAAAGCCCACCGCTAGAAACCTGCTCTGACAACAACCAACAAGGTTTCAGTGAAATCCAGAGCAGTGATGGTCATTGCAGCCCGGAAATCAGTACTGGGACCCAGAATCAGATGAATGAAAACTTGAAGATTGCTGAGGCTCTCCAAATGCAAATGGAAGTACAGAGGAAACTTTATGAACAAATTGAGGTCCAAAGACATTTGCAGCTTCGAATTGAGGCTCAAGGGAAGTACTTACAATCAGTCCTATCAAAGGCACATGAAACACTTGCAAGATACAGTTCTTCCACAACGGGCATAGAACTTGCGAAATCTGAACTTTCTCAGTTAGTATCAATAATGAACAATGCATGTCCGACCTCTCCCATTTCAGAACTGACAGAAACAAGAGGGCTCAGTTTGAGCTGTGGAGAGAGGAAACAAGACAGAGGAACCATGTGCTCACTTGAAAGTTCTTTGACATCATCTGAAAGCTCTGGGAGAACAGAAGAAAGACAACCAGTAGATGAGGCAGAGAAGCCTCAAAAGACTAAGGGTATTTCAGTTGAATTGCCATTGATGGAGATTCACTCAGAAGGTAAAAAATTCAAGGGAGATACAAGTGAAGGGAGAAAGAGAAGTGCAGCAACTGATTCTAATGGTTGCTGTGTTGATCAACCTTGTGGAAAAGGATGTGGCAACAAGTTGAGGAAATGTGAACTGTCAGAAATGCTTGACTTGAACAGCCAATATCAGAGAGACACTGACTCAAGTGTGAAAGAAATAGATTTAAATTGCAGTTCAAGCTTTTGGGGACAGTAA 1026 0.4298 MDLQNVQTQSMRLVLSTDAKPRLKWTPELHQRFTEAINQLGGAEKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKSPPLETCSDNNQQGFSEIQSSDGHCSPEISTGTQNQMNENLKIAEALQMQMEVQRKLYEQIEVQRHLQLRIEAQGKYLQSVLSKAHETLARYSSSTTGIELAKSELSQLVSIMNNACPTSPISELTETRGLSLSCGERKQDRGTMCSLESSLTSSESSGRTEERQPVDEAEKPQKTKGISVELPLMEIHSEGKKFKGDTSEGRKRSAATDSNGCCVDQPCGKGCGNKLRKCELSEMLDLNSQYQRDTDSSVKEIDLNCSSSFWGQ* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1756 341 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
Pvu2g1756 341 Gene3D - 19 77 - -
Pvu2g1756 341 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 338 IPR044848 GO:0003700
Pvu2g1756 341 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 5 338 - -
Pvu2g1756 341 MobiDBLite consensus disorder prediction 221 236 - -
Pvu2g1756 341 MobiDBLite consensus disorder prediction 237 252 - -
Pvu2g1756 341 Coils Coil 120 140 - -
Pvu2g1756 341 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
Pvu2g1756 341 MobiDBLite consensus disorder prediction 263 281 - -
Pvu2g1756 341 MobiDBLite consensus disorder prediction 218 287 - -
Pvu2g1756 341 MobiDBLite consensus disorder prediction 84 109 - -
Pvu2g1756 341 Pfam Myb-like DNA-binding domain 22 73 IPR001005 -
Pvu2g1756 341 Pfam MYB-CC type transfactor, LHEQLE motif 118 164 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1756 Pvu-Chr2 31654598 31656689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1756 11 298 G2-like Transcription Factor Family AT1G69580 50.676 6.13e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pvu2g1756 Myb_DNA-binding 1.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1756 - - gmx:100805252 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1756 2 31654598 31656689 Pvu2g1756 2 31654598 31656689 ECH