Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1740 ATGAGTTCGGGAAGCCATAGTGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGCAGAGGGTGAGTCGAACGTCGTTGATACTGTGGCACGCTCACCAAAACGACGCCGCAGCAGTGCGGAAGCTCCTGCAAGAGGATCCTTCGCTGGTTACGGCAAGGGATTACGACAACCGCACCCCGCTCCACGTCGCATCCCTCCACGGCTGGATCGAAGTCGCCACGTGTTTGATCGAATTCGGCGCGGATGTCAACGCGCAAGATCGTTGGAAAAACACTCCTCTGGCGGATGCGGAAGGAGCTAAGAAGACTGATGTGATCGAGCTTTTGCAATCTCGCGGAGGCTCGTCTTATGGGCAAACTGGAAGCCATTTTGAACCGAAGCCTGTTCCGCCGCCGTTGCCGAATAAGTGTGACTGGGAAATCGAACCTACCGAACTTGACTTCTCCAACTCCGCGAGAATCGGAAAGGGGTCTTTTGGTGAGATTTTAAAAGCCCATTGGCGTGGAACACCAGTCGCTGTTAAACGTATTCTTCCATCTCTTTCAGAAGATAGATTGGTGATTCAGGACTTCAGGCATGAGGTCAATTTGTTAGTGAAGCTTCGACACCCCAATATAGTTCAGTTTCTTGGAGCTGTTACAGACAGGAAGCCCCTTATGTTAATTACTGAGTATCTAAGAGGGGGTGATCTTCATCAGTACCTCAAAGAAAAAGGTGCACTTAGTCCAGCAACAGCTATCAACTTTTCCATGGATATTGTGAGAGGAATGGCCTATCTCCACAATGAACCAAATGTTATAATTCATCGGGACCTAAAGCCAAGGAATGTTCTTTTAGTCAATTCTAGTGCCGACCATTTAAAAGTTGGAGATTTTGGATTGAGTAAGCTTATCACTGTCCAGAGTTCTCATGATGTATACAAGATGACCGGTGAAACTGGGAGCTACCGCTACATGGCTCCTGAAGTTTTCAAACATCGGCGATATGATAAGAAGGTTGATGTGTACTCCTTTGCAATGATTTTGTATGAGATGCTTGAAGGTGAACCACCTTTTGCAAATCTCGAGCCTTATGATGGAGCAAAACGCGCTGCTGAGGGACATAGGCCTTCATTTCGGTCAAAGGGTTATACCAATGAATTGCAAGAATTAACGGAGCAGTGTTGGGCTCATGACGTGAATCGGAGACCACCCTTCATAGAGATCCTTAAACGTCTTGAAAAGATCAAGGAGAATTTACCTTCAGATAATCACTGGCATTTGTTTGCATCATAA 1284 0.4673 MSSGSHSEKEKEKEKEKEKEKQRVSRTSLILWHAHQNDAAAVRKLLQEDPSLVTARDYDNRTPLHVASLHGWIEVATCLIEFGADVNAQDRWKNTPLADAEGAKKTDVIELLQSRGGSSYGQTGSHFEPKPVPPPLPNKCDWEIEPTELDFSNSARIGKGSFGEILKAHWRGTPVAVKRILPSLSEDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTDRKPLMLITEYLRGGDLHQYLKEKGALSPATAINFSMDIVRGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLITVQSSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVYSFAMILYEMLEGEPPFANLEPYDGAKRAAEGHRPSFRSKGYTNELQELTEQCWAHDVNRRPPFIEILKRLEKIKENLPSDNHWHLFAS* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1740 427 SMART serkin_6 151 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1740 427 Pfam Protein tyrosine and serine/threonine kinase 154 409 IPR001245 GO:0004672|GO:0006468
Pvu2g1740 427 ProSitePatterns Protein kinases ATP-binding region signature. 157 178 IPR017441 GO:0005524
Pvu2g1740 427 Pfam Ankyrin repeats (3 copies) 26 90 IPR002110 GO:0005515
Pvu2g1740 427 SUPERFAMILY Ankyrin repeat 30 119 IPR036770 -
Pvu2g1740 427 CDD STKc_MAP3K-like 157 409 - -
Pvu2g1740 427 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 12 419 - -
Pvu2g1740 427 MobiDBLite consensus disorder prediction 1 25 - -
Pvu2g1740 427 PANTHER SERINE/THREONINE-PROTEIN KINASE STY8-LIKE 12 419 - -
Pvu2g1740 427 Coils Coil 7 27 - -
Pvu2g1740 427 Gene3D - 2 127 IPR036770 -
Pvu2g1740 427 PIRSF ILK 1 427 - -
Pvu2g1740 427 Gene3D Transferase(Phosphotransferase) domain 1 231 423 - -
Pvu2g1740 427 ProSiteProfiles Ankyrin repeat region circular profile. 59 91 - -
Pvu2g1740 427 SUPERFAMILY Protein kinase-like (PK-like) 141 422 IPR011009 -
Pvu2g1740 427 ProSiteProfiles Protein kinase domain profile. 151 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1740 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Pvu2g1740 427 SMART ANK_2a 59 88 IPR002110 GO:0005515
Pvu2g1740 427 ProSiteProfiles Ankyrin repeat profile. 59 91 IPR002110 GO:0005515
Pvu2g1740 427 PRINTS Tyrosine kinase catalytic domain signature 226 239 IPR001245 GO:0004672|GO:0006468
Pvu2g1740 427 PRINTS Tyrosine kinase catalytic domain signature 264 282 IPR001245 GO:0004672|GO:0006468
Pvu2g1740 427 PRINTS Tyrosine kinase catalytic domain signature 380 402 IPR001245 GO:0004672|GO:0006468
Pvu2g1740 427 Gene3D Phosphorylase Kinase; domain 1 136 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1740 Pvu-Chr2 31203299 31210318 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1740 16 427 MAP Kinase Kinase Kinase AT1G14000 83.981 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Pvu2g1740 PK_Tyr_Ser-Thr 1.3e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1740 - - gmx:100793237 783.867