Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1703 ATGGAATCTGTGTTTCAAGAAGAAGGGTCATCTTCTGTAACTTCTTCACCCCTTCAGTTTTTTTCCATGATGTCTCTTTCACCTGGCATAGGATCTCCCTATCCCTGGCTTAGAGAACTGAAATCTGAGGAAAGGGGTTTGTATTTGATCCATTTGTTGATCGGTTGTGCAAATCATGTAGCTAATGGTAGCCTTGAAAATGCAAACATGTTGCTTGAGCAGATTTCTCAGCTTGCTTCTCCTGATGGGGATACCATACAGCGAGTTGCTGCATATTTCACCCAAGCACTCGCTGATCGGATCCTCAAAACATGGCCTGGCCTCCACAGGGCACTCAATTCCACCAGAATAGCCATGGTGTCTGATGAAATTCTTGTTCAGAAGCTCTTTTTTGAGCTTTTCCCGTTCTTGAAGATGTCATATATTCTCACAAATCAGGCTATTGTTGAGGCCATGGAAGGGGAGAAAATGGTGCATGTAATTGATCTCAGTGCCACTGGGCCAGCACAGTGGATTGCTCTCCTTCGTGTTCTGAGTGCACGCCCTGAAGGTTCTCCTCATTTGAGAATCACTGGGGTGCATCACCAGAAAGAGGTTCTGGATCAGATGGCTCATAAACTCACTGAAGAGGCAGAAAAGTTGGACATTGCATTCCAGTTCAACCCTGTTGTCAGCAAGATAGAAAATCTTGATTTTGACAAACTTCGGGTGAAAACTGGGGAGGCACTTGCAATTAGTTCCATTCTGCAGTTACACTCCCTTTTGGCCTTGGATGATGATGCCTCCAGAAGAAGATCTTCAAACAATTCAAATGCAATTCAACTGCAGAAAATCCTGCAGATGAACCCAAACACACGGGGTGATTTGGCTGAAAAGGACATGGTTCATGGCTATAGCCCAAGTCCAGATTCAGCCTCAGCTTCAGCTTCATCCTCACCCGGGTCTTCATCTGCCTCAATGAAATCGGAGAGCTTTCTGAATGCCTTGTGGGGGTTATCACCAAAGATCATGGTTGTAACCGAGCAAGACTTCAATCACAACAGTTCAAACCTGATGGACAGGCTGCTAGAATCTCTGAACTCTTATGCTGCATTGTTTGATTGTTTGGAATGCACTGTCTCCAGAGCATCCTTGGACAGAATCAAGATTGAGAAGATGCTTTTGGGTGAGGAAATCAAGAACATAGTAGCTTGTGAGGGAGCTGAAAGAAGGGAAAGGCATGAAAAGATGGATAAGTGGATCCAGAGACTTGATTTATCTGGCTTTGCAAATGTGCCTTTTAGCTCTCAAGGTGTGACTCAGGCAATGAGGTTCTTGGAGAACTATGGTTGTAATGGTTATAGGATGAGGGAGGAAAATGGTTGTGCAGTGATTTACTGGCAGGACCGTACCTTGTTTTCTGTGACAGCTTGGAGATCAAGGAGGTAA 1428 0.4475 MESVFQEEGSSSVTSSPLQFFSMMSLSPGIGSPYPWLRELKSEERGLYLIHLLIGCANHVANGSLENANMLLEQISQLASPDGDTIQRVAAYFTQALADRILKTWPGLHRALNSTRIAMVSDEILVQKLFFELFPFLKMSYILTNQAIVEAMEGEKMVHVIDLSATGPAQWIALLRVLSARPEGSPHLRITGVHHQKEVLDQMAHKLTEEAEKLDIAFQFNPVVSKIENLDFDKLRVKTGEALAISSILQLHSLLALDDDASRRRSSNNSNAIQLQKILQMNPNTRGDLAEKDMVHGYSPSPDSASASASSSPGSSSASMKSESFLNALWGLSPKIMVVTEQDFNHNSSNLMDRLLESLNSYAALFDCLECTVSRASLDRIKIEKMLLGEEIKNIVACEGAERRERHEKMDKWIQRLDLSGFANVPFSSQGVTQAMRFLENYGCNGYRMREENGCAVIYWQDRTLFSVTAWRSRR* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1703 475 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 378 473 IPR005202 -
Pvu2g1703 475 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 265 IPR005202 -
Pvu2g1703 475 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 323 374 IPR005202 -
Pvu2g1703 475 ProSiteProfiles GRAS family profile. 40 472 IPR005202 -
Pvu2g1703 475 Pfam GRAS domain family 49 472 IPR005202 -
Pvu2g1703 475 MobiDBLite consensus disorder prediction 289 317 - -
Pvu2g1703 475 PANTHER BNAA06G02820D PROTEIN 378 473 IPR030008 GO:0003700|GO:0005634|GO:0009739
Pvu2g1703 475 PANTHER BNAA06G02820D PROTEIN 323 374 IPR030008 GO:0003700|GO:0005634|GO:0009739
Pvu2g1703 475 PANTHER BNAA06G02820D PROTEIN 6 265 IPR030008 GO:0003700|GO:0005634|GO:0009739
Pvu2g1703 475 MobiDBLite consensus disorder prediction 301 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1703 Pvu-Chr2 30719579 30722000 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1703 1 475 GRAS Transcription Factor Family AT1G50420 64.139 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu2g1703 GRAS 1.1e-134 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1703 - - vun:114174232 780.4