Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1687 ATGCACTGTTACAAAGACAAATCCATAGTAGAATCAATCGGTTGTGAAATGGATTCCACAGATAGTAGGAGCACAAAATCTAAAGAAACTGAACGACGTTTCGATAACTATCCCACGAAGAGAAAGCGTCCTTGCCAAGTGACCGTTGTTTCCACCACGGAAGAATCCAAGGCCGCCCCCTCCCCCTCCTCCGCAACACACGGTTCCATATCCGTGATCGGGAGACGTCGCGCAATGGAGGACGCCGTCATGGTGGTTCCCGGTTTGGTGGCGGCGGGGCAGTGGTGTGGCGGTTATGATTTCTTCGCGGTTTACGACGGACATGGCGGGACGCTCGTGGCCAACGCTTGCCGCGACAGGCTGCACCTGCTGTTGGCGGATGAGGTGAGGAAGAACGCGGAGAAGGGATTGGATTGGTACGAGGTGATGTGTTCGTGTTTCATGAAGATGGACAAGGAGATCGGAGTTGGTGGTGACGGCCATAAGTCGCGCGATGACGGTGGCGGCAACACCATGGGTTCGACGGCGGCGGTTGTGGTGGTTGGAGAGGAGGAGATTGTGGTTGCAAATTGTGGTGACTCCAGGGCGGTGTTGTGCCGTGGCGGTTTAGCTGTCCCCCTTTCGCTTGATCATAAGCCTGATCGTCCAGATGAAAGAGAGAGGATAGAAGCGGCTGGTGGGATAGTGATTAATTGGAACGGAAGTCGTGTTTTGGGAGTACTTGCTACTTCCAGATCCATCGGGGATCACTCGATGAAACCTTTTGTGATATCTCAACCTGAGACGAAGGTGTACGAGCGAACAGAGTTGGATGAGTTTGTGGTAGTGGCAAGTGACGGGTTATGGGATGTTGTGTCTAACAAGTTTGTTTGTGAGGTGGTACGAGGGTGCCTCCATGGCCAAATGAAAAGGAATTTAAAAGATGACACTGTTTTAAGCTATGCAACAGAAGCTGCATCGTTGTTAGCAGAGTTGGCTATGGCTCGTGGAAGCAAAGACAACATCAGTGTTATAGTCATCCCTCTCAACACCACTACTTCATCCTCAACTCCATATAATTAA 1062 0.5113 MHCYKDKSIVESIGCEMDSTDSRSTKSKETERRFDNYPTKRKRPCQVTVVSTTEESKAAPSPSSATHGSISVIGRRRAMEDAVMVVPGLVAAGQWCGGYDFFAVYDGHGGTLVANACRDRLHLLLADEVRKNAEKGLDWYEVMCSCFMKMDKEIGVGGDGHKSRDDGGGNTMGSTAAVVVVGEEEIVVANCGDSRAVLCRGGLAVPLSLDHKPDRPDERERIEAAGGIVINWNGSRVLGVLATSRSIGDHSMKPFVISQPETKVYERTELDEFVVVASDGLWDVVSNKFVCEVVRGCLHGQMKRNLKDDTVLSYATEAASLLAELAMARGSKDNISVIVIPLNTTTSSSTPYN* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1687 353 SUPERFAMILY PP2C-like 62 343 IPR036457 -
Pvu2g1687 353 Pfam Protein phosphatase 2C 69 335 IPR001932 -
Pvu2g1687 353 PANTHER ALPHABET, ISOFORM E-RELATED 22 344 - -
Pvu2g1687 353 MobiDBLite consensus disorder prediction 21 40 - -
Pvu2g1687 353 SMART PP2C_4 56 340 IPR001932 -
Pvu2g1687 353 ProSiteProfiles PPM-type phosphatase domain profile. 66 342 IPR001932 -
Pvu2g1687 353 ProSitePatterns PPM-type phosphatase domain signature. 101 109 IPR000222 GO:0043169
Pvu2g1687 353 Gene3D - 58 349 IPR036457 -
Pvu2g1687 353 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 22 344 - -
Pvu2g1687 353 CDD PP2Cc 67 342 IPR001932 -
Pvu2g1687 353 MobiDBLite consensus disorder prediction 15 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1687 Pvu-Chr2 30562075 30563773 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1687 63 342 PP2C-type Phosphatase Gene Family AT2G29380 48.958 6.97e-85 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1687 K14497 - gmx:100813248 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1687 2 30562075 30563773 Pvu2g1687 2 30562075 30563773 ECH