Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1685 ATGGACGGAATGCAAGAAAGAAACTCAGAGCTTGGAACCGATATTGGTTCTTCCTTATCGAACCTGATATTAACAGGTGGTTCAAACGCCCTGGACTCAATCTTCTCGAATTGCTGCCCCCCAACAAACGCCAGCAGTAGCAACTCCGTGTTGGATCATTTGGAACCATTTGGGTGTTCGGGGTTTGAGCCTTTGGGCTCTTCCGTCTACCTTCGCCAGAGGGACATCCTCCAAAAGTTCTACCAAGAAAACAGGGGGAATGGGTCTTTTCTTCCCACTTCCTTGGCGAATCCTTCTATGAACTCTGTTTACACTAGTTCGTTGACTTCTTCTTTGACCAACCCTTGCAAGAAAAAGCTCTACAGGGGAGTGAGACAGAGACACAGGGGCAAATGGGTCGCGGAAATTAGACTGCCCCAGAACAGGATGAGAGTGTGGTTGGGCACCTACGACACCGCCGAAGCCGCCGCCTATGCCTACGACCGCGCCGCCTATAAGCTACGTGGAGAGTACGCGCGCTTGAATTTCCCCAATTTGAAGGACCCCACCAAGTTGGGGTTCGGAGATTCCGCCAGATTGAACGCCTTGAAGAGCTCCGTCGACGCCAAAATCCAAGCCATATGCCAAAAGGTGAAAAGGGAGAGAGCCAAAAAGATCGCCGCCAAGAAGCTCAGTTCGGCCACCGCTCACGCCACCCGCAAGCAGAGCGAGAAGATCAATTCTTCCGCCTCCTCCTCCTCCTCCTCGCTGCCGCTGTCGCCGTCGTCGATTTTTTGCGATAATTGGGCGAACGAGTTGTTTTCGCCCAGCGTTTCGGAGGACGGGATTTGGAAGGGGGAGAACTCGCCGGCGTCGGTTTCCATGGAATGTCCAACGATGGTAACGGACGACACAGAGTTCGAAGGTTGTTCCCTGGCGAGGTTGCCTTCTTTCGATCCCGAGTTGATTTGGGAAGTTCTTGCCATTTGA 969 0.5284 MDGMQERNSELGTDIGSSLSNLILTGGSNALDSIFSNCCPPTNASSSNSVLDHLEPFGCSGFEPLGSSVYLRQRDILQKFYQENRGNGSFLPTSLANPSMNSVYTSSLTSSLTNPCKKKLYRGVRQRHRGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNFPNLKDPTKLGFGDSARLNALKSSVDAKIQAICQKVKRERAKKIAAKKLSSATAHATRKQSEKINSSASSSSSSLPLSPSSIFCDNWANELFSPSVSEDGIWKGENSPASVSMECPTMVTDDTEFEGCSLARLPSFDPELIWEVLAI* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1685 322 Pfam AP2 domain 121 170 IPR001471 GO:0003700|GO:0006355
Pvu2g1685 322 SMART rav1_2 120 183 IPR001471 GO:0003700|GO:0006355
Pvu2g1685 322 MobiDBLite consensus disorder prediction 228 253 - -
Pvu2g1685 322 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 13 321 - -
Pvu2g1685 322 MobiDBLite consensus disorder prediction 225 253 - -
Pvu2g1685 322 CDD AP2 119 179 IPR001471 GO:0003700|GO:0006355
Pvu2g1685 322 Gene3D AP2/ERF domain 120 178 IPR036955 GO:0003700|GO:0006355
Pvu2g1685 322 PRINTS Ethylene responsive element binding protein signature 121 132 IPR001471 GO:0003700|GO:0006355
Pvu2g1685 322 PRINTS Ethylene responsive element binding protein signature 143 159 IPR001471 GO:0003700|GO:0006355
Pvu2g1685 322 ProSiteProfiles AP2/ERF domain profile. 120 177 IPR001471 GO:0003700|GO:0006355
Pvu2g1685 322 SUPERFAMILY DNA-binding domain 120 177 IPR016177 GO:0003677
Pvu2g1685 322 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1685 Pvu-Chr2 30545248 30546790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1685 2 321 AP2-EREBP Transcription Factor Family AT1G64380 46.779 3.79e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu2g1685 AP2 1.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1685 - - gmx:100785364 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1685 2 30545248 30546790 Pvu2g1685 2 30545248 30546790 ECH