Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1682 ATGGAGAGTGGAAAAAGTTGTGAGCAGAAAGCACTGATGGGTGAGCTAATTCAGGGGTTGGAGTTGGCAACAAAGTTGAATGAATACTTGAATATACCCTCTTCGGTTGAGACTAGGGACTCACTACTGCAGAGGATATTGTCTTCTTTTGACAAGGCTTTGCTTATTCTAACACAGAATGCACCAAATTCAAACTCAGAAGAAGCCATGCAGCAACTAACTCAAAGTCTTGATCATGAGGACTATGAAGGTGCCCGCAAGGATGATCAAGAACTAAATCAAAATGCAAAGAAAAGAAAGAGTATGTCCAAATGGACGGAACAGGTTAGAGTGAAGATCCAAGATGGGGTTGAAGAGCCTCTCCACGATGGTTACAGCTGGAGAAAATACGGACAGAAAAAGATCCTCACTGCAAAACATCCCAGAAGCTACTATAGGTGCACATTTAGCAAAACTACGGGCTGCTGGGCGAAGAAGCAAGTGCAGAGATCAGAAGAAGACCCCAATGTCTTTGACATCAGTTACCGAGGAAGCCACATCTGTTATAAGGGAAATGGTGCCGTTCCATCACCAAAATCAGCAGAAATGGAAGAGGAACAGCAAGGTTGTGATAGTGACGTTCAGTTTCATTTTGCACAGTCATCGCAAGAAAGGCTCACAAACTACACAAACACGTTGTCTGCAGAAACGGATAACATAACGCCACATCTATTCCCTTCTTTTGAATGCATGACACAAGATAACAACCACCACACCTTTTTTCCTTCCTTGGAACCAGAGAATGATCCCTTTTTCAGCACCATTGCTCAAACATCCTTGTTATCTCCGAACACTCCTGAATCAAATTACTTTGTGTCTCCGTCTTTCACCCTACATGATGAATTCGACAGGGTCTTTGACAAGCCGTGCCCTGATTCTGATGCTGCTGGGATCGTTTTAGCTGATGCATCAACCACCAATTCTACAATTTTTTACTTTAATTTCTCACTCGATGCACTGGGAATTGGTGCAATTTTTCCCTTCAATCGTAAGTGCAATTGA 1041 0.4284 MESGKSCEQKALMGELIQGLELATKLNEYLNIPSSVETRDSLLQRILSSFDKALLILTQNAPNSNSEEAMQQLTQSLDHEDYEGARKDDQELNQNAKKRKSMSKWTEQVRVKIQDGVEEPLHDGYSWRKYGQKKILTAKHPRSYYRCTFSKTTGCWAKKQVQRSEEDPNVFDISYRGSHICYKGNGAVPSPKSAEMEEEQQGCDSDVQFHFAQSSQERLTNYTNTLSAETDNITPHLFPSFECMTQDNNHHTFFPSLEPENDPFFSTIAQTSLLSPNTPESNYFVSPSFTLHDEFDRVFDKPCPDSDAAGIVLADASTTNSTIFYFNFSLDALGIGAIFPFNRKCN* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1682 346 SUPERFAMILY WRKY DNA-binding domain 120 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g1682 346 SMART WRKY_cls 121 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g1682 346 Pfam WRKY DNA -binding domain 122 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g1682 346 Gene3D WRKY domain 104 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g1682 346 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 344 - -
Pvu2g1682 346 ProSiteProfiles WRKY domain profile. 116 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g1682 346 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 344 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1682 Pvu-Chr2 30515098 30516646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1682 8 200 WRKY Transcription Factor Family AT4G11070 39.896 5.80e-41 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu2g1682 WRKY 7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1682 - - vun:114174666 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1682 2 30515098 30516646 Pvu2g1682 2 30515098 30516646 ECH
Pvu2g1682 2 30515098 30516646 Pvu10g1168 10 37576223 37578860 ECH
Pvu2g1682 2 30515098 30516646 Pvu2g3058 2 46023368 46025419 PCT