Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1672 ATGCAACGCATTTTCTGTTTGGTCTCTTTGCTTTCTTTGGTTTCTCTCATCCTCTCCCGACCCAATGCAGAACCCACAGAGGACAAGCAAGCACTTCTTCATCTGGTCGAAAAGTTGGCTCCTTTACGACCCCTCAATTGGAACCAAACCTCTTCTCCTTGCACCTCTTGGACCGGTGTAACCTGCAACTCCGACCACTCACGAGTCATAGCCATTCACTTGCCGGGCTTCGGCTTTCACGGAACCATTCCTCCCAACACGTTAAGCCGCGTCACGTGCTTGCAAACACTCAGTCTCAGATCTAACTCCATAACTGGTCCTCTCCCTTCTGATTTCTCCAACCTCTCTAACCTTTCCTTTCTCTACCTTCAGTTCAACAATTTCTCTGGTTCCTTACCCGATTTCTCTGCCTTCAGGAACCTCTCTGTTCTCGACCTCTCCAATAACTGTTTCACTGGCACCATTCCTCTCTCCCTCTCCCATTTGACCCACCTAACTGCCATCAACCTTGCCAATAACTCGCTTTCTGGCCAAATCCCTCTCTCTCTCCACAGGTTTCCCAACTGGGCTTTCGTGGGAAACAATGTCTCTCTCCAAACAATTTCACATTCCAAATCTGCGAAACACGGTGAAACGGCGCTGTTTTGGGTTGTTGTTGCTGCTGCTCCTGTTGCTCTTGCAGCGTTCGTTGCTTTTATCCTAGTGTGCTGGTCCAGAAAGAAGAAAGGGGATTCCTTTGCTCGGAAGTTGCAGAAGGGAGATATGTCTCCGGAAAAAGTAGTTTCGAGGGACCTTGATGCGAATAATAAAATATTTTTCTTTGAGGGGTGTAGCTATGCGTTTGACTTGGAGGATTTGTTGAGGGCCTCTGCTGAGGTACTGGGGAAGGGGACGTTTGGTGCTGCATATAAGGCTGCGTTAGAGGATGCTACCACTGTTGTTGTGAAGAGGTTGAAGGAAGTGGGTGTTGGAAAGAGGGACTTTGAGCAGCACATGGAGGTTGTGGGGAATCTGAAACATGAGAATGTGGTTCAGCTAAAGGGGTACTACTATTCCAAAGACGAGAAGCTCATGGTCTATGATTACTACACTCAAGGGAGTCTCTCTGCTTTGTTGCATGGTAAGAGAGGAGAGGATAGGGTGCCTTTAGATTGGGAGACTCGAATGAAAATTGCTTTGGGTGCTGCACGAGGCCTCACTCGCATCCATTGCGAGAATGGGGTGAAGCTTGTGCATGGCAATATCAGATCCTCAAATATCTTTGTGAATACTAAACAGTATGGTTGTGTGTCTGATCTTGGCCTAGCAACAATTATGAGTTCAGTTCCCATACCCATCTCACGAGCCGCTGGTTACAGAGCACCTGAAGTTACAGACACGAGGAAAGCAACACAACCTGCTGATGTTTACAGCTTTGGTGTGGTCTTGCTAGAGCTTCTCACTGGAAAATCCCCTGTGTACACAACTGGGGGCGATGAGATTGTGCACTTGGTGAGATGGGTTCATTCGGTTGTGAGAGAAGAGTGGACAGCAGAAGTGTTTGACTTGGAGTTGATCAGGTATCCCAACATAGAGGAAGAGATGGTGGAAATGTTGCAGATAGCCATGTCATGCGTGGTGAGGGATCCTGATCAGAGGCCTAAGATGTCGGAAGTTGTAAAAATGATAGAAAATGTGAGGCAGATTGATACAGTAGTGAATCAGCAAGCATCATCTGAGAACCAAGCCAAATCTGCAACACAAACCCCTTTAACCACTCTGCGTGATATTTGA 1773 0.4738 MQRIFCLVSLLSLVSLILSRPNAEPTEDKQALLHLVEKLAPLRPLNWNQTSSPCTSWTGVTCNSDHSRVIAIHLPGFGFHGTIPPNTLSRVTCLQTLSLRSNSITGPLPSDFSNLSNLSFLYLQFNNFSGSLPDFSAFRNLSVLDLSNNCFTGTIPLSLSHLTHLTAINLANNSLSGQIPLSLHRFPNWAFVGNNVSLQTISHSKSAKHGETALFWVVVAAAPVALAAFVAFILVCWSRKKKGDSFARKLQKGDMSPEKVVSRDLDANNKIFFFEGCSYAFDLEDLLRASAEVLGKGTFGAAYKAALEDATTVVVKRLKEVGVGKRDFEQHMEVVGNLKHENVVQLKGYYYSKDEKLMVYDYYTQGSLSALLHGKRGEDRVPLDWETRMKIALGAARGLTRIHCENGVKLVHGNIRSSNIFVNTKQYGCVSDLGLATIMSSVPIPISRAAGYRAPEVTDTRKATQPADVYSFGVVLLELLTGKSPVYTTGGDEIVHLVRWVHSVVREEWTAEVFDLELIRYPNIEEEMVEMLQIAMSCVVRDPDQRPKMSEVVKMIENVRQIDTVVNQQASSENQAKSATQTPLTTLRDI* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1672 590 Pfam Protein kinase domain 291 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1672 590 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Pvu2g1672 590 ProSiteProfiles Protein kinase domain profile. 288 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1672 590 Gene3D Phosphorylase Kinase; domain 1 256 362 - -
Pvu2g1672 590 ProSitePatterns Protein kinases ATP-binding region signature. 294 316 IPR017441 GO:0005524
Pvu2g1672 590 Gene3D Ribonuclease Inhibitor 25 206 IPR032675 -
Pvu2g1672 590 Gene3D Transferase(Phosphotransferase) domain 1 364 583 - -
Pvu2g1672 590 PANTHER OS05G0588300 PROTEIN 18 569 - -
Pvu2g1672 590 SUPERFAMILY L domain-like 41 199 - -
Pvu2g1672 590 PANTHER PROTEIN, PUTATIVE-RELATED 18 569 - -
Pvu2g1672 590 MobiDBLite consensus disorder prediction 568 590 - -
Pvu2g1672 590 Pfam Leucine Rich Repeat 94 115 IPR001611 GO:0005515
Pvu2g1672 590 Pfam Leucine Rich Repeat 140 162 IPR001611 GO:0005515
Pvu2g1672 590 SUPERFAMILY Protein kinase-like (PK-like) 292 556 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1672 Pvu-Chr2 30420113 30423093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1672 17 583 Receptor kinase-like Gene Family AT4G23740 59.289 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu2g1672 Pkinase 1.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1672 - - gmx:100783234 944.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1672 2 30420113 30423093 Pvu2g3042 2 45915787 45920151 PCT