Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1660 ATGGGAAACTCTAACAGCCAAGCTTATTCCCAAACGCAGCCACATTCCGAGCATCACCAGCATCAACCCCAACCTTCCAACGGCGTCAGCGTCCTCCCTCCCAATTCCAAGCCCACCGTGGGCCGGGTCCTGGACCGGCCCATGGAGGACGTCCGCTCCGATTACATATTCGGGCGCGAGCTGGGCCGCGGGCAATTCGGCGTCACCTACTCAGTGACTCACAAGCACACCAACGAAAACTTGGCGTGCAAATCCATTGCCAAGCGCAAACTCCACCGCGACGACTTGGAAGACGTCCGTCGCGAGGTGCAGATCATGCACCACCTAACCGGCCACCGAAACATCGTCGAGCTTAAGGGAGCCTGCGAGGACCGACATTCCGTCAATCTCGTCATGGAGCTGTGCGCCGGCGGCGAGCTCTTCGACCGGATCATCGCCAAGGGCCATTACTCCGAGCGCGCCGCCGCCGACCTCTGCCGCCAGATCGCCACGGTGATTCACGATTGCCACAGCATGGGAGTGATGCACAGGGATCTGAAGCCTGAGAACTTCTTGTTCCTCGGCAAGGAGGAAAACTCGCCGCTTAAGGCCACGGACTTCGGTCTCTCCGTGTTCTTCAAGCCCGGCGATGTGTTTAAGGACCTTGTTGGGAGTGCGTATTATGTTGCTCCTGAAGTGCTGCGTAAAAGTTATGGACCCGAAGCTGATATTTGGAGTGCTGGGGTTATATTGTTCATTCTGCTCTCTGGTGTCCCTCCCTTCAGGGCAGGAAATGAACAGGGTATCTTTGATGCTATTCTTCTTGGATATATTAATTTTGCATCAGATCATTGGTCTTCCATTTCAAGTAGTGCCAAAGATTTGGTGAAGAACATGTTACGAGCTGATCCCAAAAAAAGGCTCTCGGCAGTTGAAGTCCTTAATCATCCTTGGCTGAGAGAAGATGGAGCATCTGATAAACCTCTAGATATAACTGTTTTAACCAGAATGAAACAATTCAGGGCAATGAACAAGCTGAAGAAAGTAGCTCTGAAGGTTATTGCTGAAAATCTTTCTGAAGAAGAAATCATTGGCTTGAAGGAAATGTTTAAATCCATGGACACAGATAATAATGGAACAATCACTTTTGAAGAGTTGAAAGCTGGACTTCCAAAACTGGGTACTAAGATTTCTGAGTCTGAAGTAAGCCAGTTAATGGAAGCGGCTGATGTAGACGGAAATGGGACCATTGATTACATTGAATTTATAACAGCTACCATGCACATGAATAGAATGGAAAGAGAGGACCACCTATATAAAGCTTTTGAATATTTTGACAAGGATAGAAGCGGGTACATCACTATGGAAGAGTTGGAATCTGCCCTTAAAAAATATAATATGGGTGATGAGAAAATAAAGGAAATAATTGCCGAAGTCGATACAGACAATGATGGAAGAATTAACTATGACGAGTTTGTAGCCATGATGAGAAAAGGCAATCCAGATTTAGTAACCAAACGTCGCAAATAA 1509 0.4765 MGNSNSQAYSQTQPHSEHHQHQPQPSNGVSVLPPNSKPTVGRVLDRPMEDVRSDYIFGRELGRGQFGVTYSVTHKHTNENLACKSIAKRKLHRDDLEDVRREVQIMHHLTGHRNIVELKGACEDRHSVNLVMELCAGGELFDRIIAKGHYSERAAADLCRQIATVIHDCHSMGVMHRDLKPENFLFLGKEENSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRKSYGPEADIWSAGVILFILLSGVPPFRAGNEQGIFDAILLGYINFASDHWSSISSSAKDLVKNMLRADPKKRLSAVEVLNHPWLREDGASDKPLDITVLTRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNNGTITFEELKAGLPKLGTKISESEVSQLMEAADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDKDRSGYITMEELESALKKYNMGDEKIKEIIAEVDTDNDGRINYDEFVAMMRKGNPDLVTKRRK* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1660 502 SMART serkin_6 55 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1660 502 Pfam EF-hand domain pair 429 490 IPR002048 GO:0005509
Pvu2g1660 502 Pfam EF-hand domain pair 359 419 IPR002048 GO:0005509
Pvu2g1660 502 ProSiteProfiles EF-hand calcium-binding domain profile. 426 456 IPR002048 GO:0005509
Pvu2g1660 502 SUPERFAMILY EF-hand 335 491 IPR011992 -
Pvu2g1660 502 SUPERFAMILY Protein kinase-like (PK-like) 39 320 IPR011009 -
Pvu2g1660 502 SMART efh_1 358 386 IPR002048 GO:0005509
Pvu2g1660 502 SMART efh_1 430 458 IPR002048 GO:0005509
Pvu2g1660 502 SMART efh_1 464 492 IPR002048 GO:0005509
Pvu2g1660 502 SMART efh_1 394 422 IPR002048 GO:0005509
Pvu2g1660 502 MobiDBLite consensus disorder prediction 1 45 - -
Pvu2g1660 502 ProSitePatterns Protein kinases ATP-binding region signature. 61 88 IPR017441 GO:0005524
Pvu2g1660 502 ProSitePatterns EF-hand calcium-binding domain. 473 485 IPR018247 -
Pvu2g1660 502 ProSiteProfiles EF-hand calcium-binding domain profile. 354 389 IPR002048 GO:0005509
Pvu2g1660 502 PANTHER SERINE/THREONINE-PROTEIN KINASE 29 495 - -
Pvu2g1660 502 ProSitePatterns EF-hand calcium-binding domain. 403 415 IPR018247 -
Pvu2g1660 502 ProSiteProfiles Protein kinase domain profile. 55 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1660 502 ProSiteProfiles EF-hand calcium-binding domain profile. 460 495 IPR002048 GO:0005509
Pvu2g1660 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Pvu2g1660 502 ProSitePatterns EF-hand calcium-binding domain. 367 379 IPR018247 -
Pvu2g1660 502 ProSiteProfiles EF-hand calcium-binding domain profile. 390 425 IPR002048 GO:0005509
Pvu2g1660 502 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 15 29 495 - -
Pvu2g1660 502 Gene3D Transferase(Phosphotransferase) domain 1 140 319 - -
Pvu2g1660 502 Gene3D Phosphorylase Kinase; domain 1 57 139 - -
Pvu2g1660 502 CDD STKc_CAMK 54 311 - -
Pvu2g1660 502 Gene3D - 320 493 - -
Pvu2g1660 502 Pfam Protein kinase domain 57 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1660 502 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1660 Pvu-Chr2 30307579 30313970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1660 41 502 EF-hand Containing Proteins AT4G23650 78.710 0.0 770
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pvu2g1660 Pkinase 5.8e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1660 K13412 - gmx:100817321 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1660 2 30307579 30313970 Pvu2g3031 2 45785936 45794727 PCT