Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1657 TTCAATAATCCTCCTAAGATTCGTAGAAATGCGTCTGCCTCTGCAAATATCAGTAACCTTTCTTTGCAAAGCAATCCTACAAACTCAGCCCCTCAGAAGAACATAACCAACTGGCCTTTTGATGAAAAGCTTCTTGTACAAACTCTTTACAAGGTTCTAGTTTATGTATCAAAAACCTATCCCATTGTTCTATATTTGCGGGATGTTGACAAGTTGTTGCATAGATCACGACGGGTATATAACCTATTCCAGATAATGTTGAATAAACTACAAGGACGAATTTTGATTCTTGGTTCGCGAGTTTTGAGTTCTGGTAGTGACTACAAAGAAATGGATGAGAGACTTTCTTCCGTTTTCCCCTACAACATAGAACTGAGCCCCCCAGAAGATGAATCTTATATCGTCAGCTGGAAGTCTCAATTTGAAGAGGACATGAAGACAATACAGACTCAGGATAATAGGAACCATATCATGGAAGTTCTTGCAGCCAATGATCTTTATTGTGATGACCTGGGTTCCATCTGTGTGGCAGATACAATGGCTTTCAGTAACAATATAGAAGAGATCGTCGTTTCAGCAATTTCTTATCATTTAATGAATAACAAAGATCCTGAATACCAAAATGGCAAACTAGTCATTCCTTGCAGCAGTTTGTCCCATGCATTGGGTATATTCCAGGAGGGGAAATTCAGCACAAGAGATACATTGAAATTAGAAGCCCAAGCAGTTACGACTGAGCCGAGAGAAGAAGGAGTTGTTGTCAAGCCAGAAACAACGTCAGAAAATCCTGCTCCTGAAATAAAGGCTGAATCAGATATATCAACTTTAGTGGGAAAAACTGACGGTGAAAATACAGCTCCTGCACCAAAAGTTGAAGTTGCCCCTGACAATGAGTTTGAGAAGCGAATAAGGCCTGAGGTAATACCTGCAAACGAGATTGGTGTAAAATTCTCTGATGTTGGTGCCTTAGATGAGACCAAAGAATCGCTTCAAGAACTAGTTATGCTTCCTCTTCGAAGGCCAGACCTTTTCCGGGGAGGCCTTCTAAAGCCTTGTAAAGGAATACTGCTTTTTGGACCTCCTGGCACAGGGAAGACAATGCTGGCAAAGGCCATTGCAAACGAAGCTGGAGCAAGTTTCATTAATGTGTCCATGTCTACCGTCACCTCTAAATGGTTTGGTGAAGATGAGAAGAATGTTCGAGCTTTGTTCACACTAGCAGCCAAGGTCTCCCCAACTATTATATTTGTTGATGAGGTTGATAGTATGCTGGGACAACGTACCAGAGTTGGAGAGCATGAAGCCATGCGGAAAATAAAGAATGAGTTTATGACACTTTGGGATGGACTAATGACAAATCCAGGGGAGCGCATCCTTGTTCTTGCTGCCACCAATAGGCCGTTTGACCTAGATGAAGCAATAATTAGGAGATTTGAAAGGAGAATAATGGTGGGGATGCCATGCCCGGAGAACAGGGAAAAAATTTTGAGGACTCTTTTGGGGAAAGAAAAGGTGGACGAGAAACTTGATTTTAAGGAACTCGCAACTATGACAGAAGGATACAGCGGAAGCGATCTCAAGAACTTGTGCACAACCGCTGCTTACAGACCTGTTAGAGAGTTAATCCAACAAGAGAGACTAAAAATGCTGGAGAAAAGGCAGAAAGGTGTTGAAGAACAGAATAACAATGTCCAAGAAGCTACCCAAGATGCTTCGGAAGGAAAAGAGGAAGTTCAACAGGAAAGAGTAATTTCCCTTAGACCTTTGAACATTAAAGACTTCAAAGAGGCTAGGAGTCAGGTTTCCGCAAGCTACGCAGCTGAGGGGGCTGGAATGAGTGAGTTAAAGCAGTGGAATGAAATGTACGGGGAAGGAGGTTCAAGGAAGAAAGAGCAATTATCTTACTTCCTGTGA 1914 0.4211 FNNPPKIRRNASASANISNLSLQSNPTNSAPQKNITNWPFDEKLLVQTLYKVLVYVSKTYPIVLYLRDVDKLLHRSRRVYNLFQIMLNKLQGRILILGSRVLSSGSDYKEMDERLSSVFPYNIELSPPEDESYIVSWKSQFEEDMKTIQTQDNRNHIMEVLAANDLYCDDLGSICVADTMAFSNNIEEIVVSAISYHLMNNKDPEYQNGKLVIPCSSLSHALGIFQEGKFSTRDTLKLEAQAVTTEPREEGVVVKPETTSENPAPEIKAESDISTLVGKTDGENTAPAPKVEVAPDNEFEKRIRPEVIPANEIGVKFSDVGALDETKESLQELVMLPLRRPDLFRGGLLKPCKGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTVTSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTLWDGLMTNPGERILVLAATNRPFDLDEAIIRRFERRIMVGMPCPENREKILRTLLGKEKVDEKLDFKELATMTEGYSGSDLKNLCTTAAYRPVRELIQQERLKMLEKRQKGVEEQNNNVQEATQDASEGKEEVQQERVISLRPLNIKDFKEARSQVSASYAAEGAGMSELKQWNEMYGEGGSRKKEQLSYFL* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1657 637 Pfam AAA+ lid domain 509 544 IPR041569 -
Pvu2g1657 637 Gene3D - 314 573 IPR027417 -
Pvu2g1657 637 CDD AAA 353 485 - -
Pvu2g1657 637 Pfam ATPase family associated with various cellular activities (AAA) 355 485 IPR003959 GO:0005524|GO:0016887
Pvu2g1657 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 315 599 IPR027417 -
Pvu2g1657 637 MobiDBLite consensus disorder prediction 553 579 - -
Pvu2g1657 637 Gene3D - 487 569 - -
Pvu2g1657 637 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 6 637 - -
Pvu2g1657 637 SMART AAA_5 351 488 IPR003593 -
Pvu2g1657 637 ProSitePatterns AAA-protein family signature. 458 477 IPR003960 GO:0005524|GO:0016887
Pvu2g1657 637 MobiDBLite consensus disorder prediction 243 266 - -
Pvu2g1657 637 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 6 637 - -
Pvu2g1657 637 Coils Coil 547 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1657 Pvu-Chr2 30299171 30303258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1657 315 549 Calmodulin-binding Proteins AT3G56690 38.655 1.26e-43 166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1657 2 30299171 30303258 Pvu2g3028 2 45759059 45764727 PCT