Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu2g1648 | ATGGTTTGGGATTTGCAATCTATTGTGGGATGCACCATTGCCCCAGCCACCACTATGGACAACCCGAATCTCATTCTTTCTCAAGGTTTTTGTGCTGAACCAGATGACCTACTTTACGATTTTCAGGAATTCTCAGAAACCAAAACGGTGCTTAATGAATTGGAAGAGATTTACAAACCTTTCTACCCCAATGTTCATCACAACCCTCATCCCATCATTTCAAGTTCCCAACCTATCCCAGATAAAAATGTCAAAGAACTCAAACTATCAAACAAAGTAGACGTGCAAGCACAAGATTTGCACGACACGGAAGCATCTACATGCAGAAAAAGCAAAAAGAAGCAGAACAAGAAGAGGGTGGTGAAACATATGAACGCGGTAGATGGTGTGTCAGATCCATGGGCATGGCGTAAATATGGGCAGAAACCAATAAAGGGATCACCCTATCCACGAAGCTATTATAGATGCAGCAGCTCCAAAGGATGTTTGGCTAGGAAATTCGTGGAACTTAGCCATTTGGATCCCGGAGTTTTGATAGTTACCTACACCGCAGAACATAGTCCTCACCCAACTCGCAAAAACTCAAGAACAGGGAGGGGCAGTTCCACCATTGCACCTCCAACAACTCATAGTGATGATATGCAGACTCTTTCTTCAAGGATAAATGTGGTTGTGGAGGCCCTGGAAGTTGAGCATGAGCGTTTTAAAGTTCAACAGTAA | 720 | 0.4347 | MVWDLQSIVGCTIAPATTMDNPNLILSQGFCAEPDDLLYDFQEFSETKTVLNELEEIYKPFYPNVHHNPHPIISSSQPIPDKNVKELKLSNKVDVQAQDLHDTEASTCRKSKKKQNKKRVVKHMNAVDGVSDPWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKFVELSHLDPGVLIVTYTAEHSPHPTRKNSRTGRGSSTIAPPTTHSDDMQTLSSRINVVVEALEVEHERFKVQQ* | 240 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu2g1648 | 239 | MobiDBLite | consensus disorder prediction | 185 | 216 | - | - | |
Pvu2g1648 | 239 | Gene3D | WRKY domain | 109 | 184 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pvu2g1648 | 239 | PANTHER | WRKY TRANSCRIPTION FACTOR 63-RELATED | 3 | 218 | - | - | |
Pvu2g1648 | 239 | ProSiteProfiles | WRKY domain profile. | 125 | 187 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pvu2g1648 | 239 | Pfam | WRKY DNA -binding domain | 132 | 187 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pvu2g1648 | 239 | SUPERFAMILY | WRKY DNA-binding domain | 124 | 188 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pvu2g1648 | 239 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 3 | 218 | IPR044810 | GO:0003700 | |
Pvu2g1648 | 239 | SMART | WRKY_cls | 130 | 191 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pvu2g1648 | 239 | MobiDBLite | consensus disorder prediction | 194 | 216 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu2g1648 | Pvu-Chr2 | 30201373 | 30202358 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu2g1648 | 109 | 198 | WRKY Transcription Factor Family | AT5G52830 | 64.835 | 6.06e-35 | 125 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Pvu2g1648 | WRKY | 3.4e-21 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu2g1648 | K13426 | K13425 | gmx:102667019 | 257.684 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pvu2g1648 | 2 | 30201373 | 30202358 | Pvu2g1648 | 2 | 30201373 | 30202358 | ECH | |
Pvu2g1648 | 2 | 30201373 | 30202358 | Pvu4g1125 | 4 | 34620507 | 34622280 | ECH | |
Pvu2g1648 | 2 | 30201373 | 30202358 | Pvu7g0770 | 7 | 6907213 | 6908842 | ECH | |
Pvu2g1648 | 2 | 30201373 | 30202358 | Pvu10g1086 | 10 | 36231937 | 36233733 | ECH | |
Pvu2g1648 | 2 | 30201373 | 30202358 | Pvu8g0593 | 8 | 5181941 | 5183860 | ECH | |
Pvu2g1648 | 2 | 30201373 | 30202358 | Pvu2g3018 | 2 | 45663178 | 45664544 | PCT |