Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1643 ATGATTATTTCCGAGAAGAACCGTCGAGAGATCTGCAAATACCTCTTTCAAGAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCGAAGCACCCGGAGATTGATGTTCCAAATCTGCAGGTGATAAAGTTGATGCAGAGCTTCAAGTCTAGGGAGTACGTGCGCGAGACATTTGCATGGATGCATTATTACTGGTTCCTCACCAACGATGGAATTGAGTTCCTTAGAACATACCTCAACCTTCCCTCGGAAATCGTGCCGGCCACTCTTAAGAAGCAGGCCAAGCCCGCCGGAAGACCGTTCGGTGGCCCACCCGGTGATCGCCCCAGAGGCCCACCTCGCTTTGATGGAGAGAGGAGATTCGGTGGTGATAGAGATGGATACCGTGGTGGTCCCCGGGGAGCTGGTGGTGACTTTGGAGACAAGGGTGGAGCGCCTGCTGACTACAGACCTTCGTTTGGGGGTCCCAGTGGAAGGCCTGGTTTCGGTCGCGGTGCTGGTGGTTTTGGTGCACCAACAAGTTCAAACATTCCTTAA 540 0.5296 MIISEKNRREICKYLFQEGVCFAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFDGERRFGGDRDGYRGGPRGAGGDFGDKGGAPADYRPSFGGPSGRPGFGRGAGGFGAPTSSNIP* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1643 179 Pfam Plectin/S10 domain 3 94 IPR005326 -
Pvu2g1643 179 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 178 - -
Pvu2g1643 179 PANTHER 40S RIBOSOMAL PROTEIN S10 1 178 IPR037447 -
Pvu2g1643 179 Gene3D - 1 104 IPR036388 -
Pvu2g1643 179 MobiDBLite consensus disorder prediction 112 128 - -
Pvu2g1643 179 MobiDBLite consensus disorder prediction 91 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1643 Pvu-Chr2 30148698 30151207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1643 1 179 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 75.419 2.14e-78 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1643 K02947 K09422 gmx:100803556 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1643 2 30148698 30151207 Pvu2g1643 2 30148698 30151207 ECH
Pvu2g1643 2 30148698 30151207 Pvu2g3011 2 45579950 45582671 PCT