Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1642 ATGAGTGGGAAAGGCAAAGAGGAAGAAGGGATTAAGAGGGTAATGATTCACGGAGGTCGATACGTGCAATACAACGTTTATGGAAACTTGTTCGAGCTACCCTCCAAGTATGTCCCTCCGATTCGCCCTGTCGGAAGGGGCGCATACGGCGTCGTTTGTGCTGCTGTTAATTGCGATACGCACGAGGAAGTTGCCATCAAAAAGATTGGGAACGCCTTTGACAACATCATTGACGCTAAACGGACTTTGAGGGAGATTAAGCTCCTTCGCCACATGGACCATGAAAATTATTTTTTATATCAGCTGTTACGGGGGCTGAAATATGTGCATTCTGCTAATGTCTTGCACCGAGATCTTAAGCCCAGTAATTTGCTTCTGAATGCGAACTGTGACCTTAAAATTGCTGACTTTGGTTTGGCAAGGGTAACATCTGAAACGGATTTCATGACGGAGTATGTGGTCACCCGGTGGTACCGTGCCCCGGAATTGCTCCTTACTTGTTCGGAGTACACCTCTGCTATTGACGTTTGGTCTGTTGGTTGCATATTTGGTGAAGTTATGACCAGGGAACCCTTGTTTCCTGGGAAAGATTATGTTCATCAACTAATGCTTATAACGGAGTTATTAGGTTCACCAGATGATGCCAATCTTGAATTTCTTCGAAATGGAAATGCTAAAAGATATATTCGACAGCTTCCCCCTCGTAGGAAGCAAAATTTCTCGGCTAGATTCCCAAATATGTCTCCTGAGGCATTGGATTTACTAGAGAAGATGCTTATCTTTGATCCCAACAAACGCATTACAGTTGATGAAGCACTATGTCACCCATATCTTTCATCACTTCATGACATCAATGATGAACCAGTTGGTCCTGGGCAATTCAACTTTGATTTTGAGCAGCCAACATGCACTGAAGAGCACATCAAGGAGCTCATCTGGAAGGAATCAGTGAAATACAATCCCGATCCACCCAGTCAATAA 981 0.4404 MSGKGKEEEGIKRVMIHGGRYVQYNVYGNLFELPSKYVPPIRPVGRGAYGVVCAAVNCDTHEEVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHENYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIADFGLARVTSETDFMTEYVVTRWYRAPELLLTCSEYTSAIDVWSVGCIFGEVMTREPLFPGKDYVHQLMLITELLGSPDDANLEFLRNGNAKRYIRQLPPRRKQNFSARFPNMSPEALDLLEKMLIFDPNKRITVDEALCHPYLSSLHDINDEPVGPGQFNFDFEQPTCTEEHIKELIWKESVKYNPDPPSQ* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1642 326 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 96 325 - -
Pvu2g1642 326 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 15 96 - -
Pvu2g1642 326 SMART serkin_6 38 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1642 326 Gene3D Phosphorylase Kinase; domain 1 15 96 - -
Pvu2g1642 326 ProSitePatterns Serine/Threonine protein kinases active-site signature. 114 126 IPR008271 GO:0004672|GO:0006468
Pvu2g1642 326 Pfam Protein kinase domain 98 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1642 326 Pfam Protein kinase domain 42 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1642 326 SUPERFAMILY Protein kinase-like (PK-like) 41 286 IPR011009 -
Pvu2g1642 326 ProSitePatterns Protein kinases ATP-binding region signature. 44 68 IPR017441 GO:0005524
Pvu2g1642 326 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 15 96 - -
Pvu2g1642 326 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 96 325 - -
Pvu2g1642 326 ProSiteProfiles Protein kinase domain profile. 1 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1642 326 Gene3D Transferase(Phosphotransferase) domain 1 97 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1642 Pvu-Chr2 30143791 30147397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1642 3 321 MAP Kinase Gene Family AT4G01370 69.315 0.0 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pvu2g1642 Pkinase 3.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1642 - - gmx:100803024 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1642 2 30143791 30147397 Pvu2g3010 2 45574376 45577692 PCT