Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu2g1634 | ATGCTTTTGGGGTCATTACTTTATGATCAAAATATTGTCCCATTTCATCTCATGGTCCATGCTCCATCCCTGTCATTCTCAACAAAACCAAACCCCAATTTCGGTATTTCAGATCAAAATCTCACCCCTCTATTTAACTCCTCCTTCAAAACCAAACTGTCACCTCTTCTTCCCCATCTCAACACACTTCTGCTGTCACTCACAAACATGGGCTTTCCCGTTGGCTACACAGAATTGCTACTGCCCAAGGTGCTTGTGCAGCTGCTATCCCTATTGGGCCTCATCAGGAAACTCCTCACCCTCCTCTTGTGCTACATGGGCTTCCACGATTTCTTCCAACCCGACATTGCCTGGCCGGAGATCCTCCCGGAATTGCAGTCCATGTCGGCGGTGCTCATCCGGGAAATCCTGCCCGTGGTGAAATTCTCCGAGATGGCGGCGGCGGAGGCGGCGGAGAGTTGCGCGGTGTGTCTGTACGAGTTCGAGGGAGAGGACGAGATCAGACGGCTGACAAACTGCCGCCACATATTCCACAGAGGGTGTCTGGACCGTTGGATGGGGTACGATCAAAGGACGTGCCCCCTCTGTCGGACGCCCTTCATACCCCACCACATGCAAGCTGCCTTCAATGATAGACTCTGGGCTGCTTCAGGGATCCCTCAATTCCATTACCACGATGAATGA | 684 | 0.5219 | MLLGSLLYDQNIVPFHLMVHAPSLSFSTKPNPNFGISDQNLTPLFNSSFKTKLSPLLPHLNTLLLSLTNMGFPVGYTELLLPKVLVQLLSLLGLIRKLLTLLLCYMGFHDFFQPDIAWPEILPELQSMSAVLIREILPVVKFSEMAAAEAAESCAVCLYEFEGEDEIRRLTNCRHIFHRGCLDRWMGYDQRTCPLCRTPFIPHHMQAAFNDRLWAASGIPQFHYHDE* | 228 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu2g1634 | 227 | SMART | ring_2 | 154 | 196 | IPR001841 | - | |
Pvu2g1634 | 227 | SUPERFAMILY | RING/U-box | 137 | 203 | - | - | |
Pvu2g1634 | 227 | PANTHER | BRH1 RING FINGER PROTEIN | 70 | 224 | - | - | |
Pvu2g1634 | 227 | CDD | RING-H2 | 154 | 197 | - | - | |
Pvu2g1634 | 227 | ProSiteProfiles | Zinc finger RING-type profile. | 154 | 197 | IPR001841 | - | |
Pvu2g1634 | 227 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 131 | 202 | IPR013083 | - | |
Pvu2g1634 | 227 | Pfam | Ring finger domain | 153 | 197 | IPR001841 | - | |
Pvu2g1634 | 227 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 70 | 224 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu2g1634 | Pvu-Chr2 | 30054720 | 30056036 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu2g1634 | 70 | 227 | C3H Transcription Factor Family | AT1G63840 | 57.927 | 4.84e-62 | 189 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu2g1634 | K16281 | - | gmx:102665617 | 267.314 |