Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1631 ATGTCTTCTGATCTCTATACTTTTGACATTCCTTTTCCCAGACATTCAGACACAGACAACATGGTCTCCTATGATGCAGATGGAAATCTTATGTTTTTATCTGACCCTTATTCCTTCCCTTTCCTCACTGCCTCTCCAGTGCATGATGTGCCTCAAGGGAACCCTTCTTTCTTCTCTTTTTCTCCCCAGGAAAAGGAGAGTCTCTATCATGCTGACCCGGCGCAGCCTCTGTCAAATGGCTCAAATATAAAGTCTGAGTTTAGAAGTTTCTCTGCTTTGCATGGCTCCGAAGTGACAACAAGTGAGGAGTGCCAAATGGTTGTGGATTACTTCCGCAATCACCACTTTCTTTCTCAAACTTCCCATGCATCTGACAGTGCATCCAAGGTAATACAAAGGAGCTTCAGCTGTAACTCTTTTGGTGGGAAGCCAGATTTCCCCTTTGAACCTCACCCTGACGCTCTCATGGACACCCCAAATTTTCAATGCCATGCTCTGCTTTCCCCTGAAAACAATTTCTTCATGGGACAAATGAGGAGGGTGTGCAGTACAGGAGATTTACAGAACACCAAAGCAACAGATATGTCTCAAGTGGAGAGCCCCTTGTTGGAGGAGGCATACTTCAAAGTGGGGCGTTACAGTGCCGAAGAAAGAAAAGAAAAAATCTCGAAATACAGAGCGAAGAGAAGCCAGAGGAAGTTCAACAAAATTATTAAGTATGCATGCCGAAAGACGCTAGCCGACAATCGAACCCGCATACGTGGCAGATTCGCTCGCAACGACGAAATCAGCGAGATTCCGAAAGCACTTTCATCAACTTCAACCACAGAAGAATATGAAGACGAATTCTGGGTTGAATTCATTGAAGGATTAAACGAGGAGGTGATCGGTTAG 894 0.4485 MSSDLYTFDIPFPRHSDTDNMVSYDADGNLMFLSDPYSFPFLTASPVHDVPQGNPSFFSFSPQEKESLYHADPAQPLSNGSNIKSEFRSFSALHGSEVTTSEECQMVVDYFRNHHFLSQTSHASDSASKVIQRSFSCNSFGGKPDFPFEPHPDALMDTPNFQCHALLSPENNFFMGQMRRVCSTGDLQNTKATDMSQVESPLLEEAYFKVGRYSAEERKEKISKYRAKRSQRKFNKIIKYACRKTLADNRTRIRGRFARNDEISEIPKALSSTSTTEEYEDEFWVEFIEGLNEEVIG* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1631 297 ProSiteProfiles CCT domain profile. 218 260 IPR010402 GO:0005515
Pvu2g1631 297 PANTHER CCT MOTIF FAMILY PROTEIN 37 294 - -
Pvu2g1631 297 Pfam CCT motif 218 260 IPR010402 GO:0005515
Pvu2g1631 297 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 37 294 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1631 Pvu-Chr2 30039853 30041844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1631 214 265 C2C2-CO-like Transcription Factor Family AT5G24930 46.154 3.18e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu2g1631 CCT 1.2e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1631 - - gmx:100786853 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1631 2 30039853 30041844 Pvu2g1631 2 30039853 30041844 ECH
Pvu2g1631 2 30039853 30041844 Pvu2g3002 2 45476237 45477814 PCT