Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1619 ATGGATGGAAGAGAAGGTATGGGTTTTCCTGGCGGCTCTGCTCCGTATTACATGCATCATAGAGGAGGAGGGGTTGGTGGGTCTGGTCCTGGAACCGGAACACCCTCTGGGTTCCAACCACCTTCTGTTTTCAGAGCTTTGTCAAATGTCTCTTCAGGTTCTTCATACTCAGTAGAGGCTAAGCCTCAGGCTCAGTCCCAGCCCCAGCCTCAGCCTCAACGTGGTGGCTTTGGTCATGGCATAAACTTAGGTTCTCCACCTGACGGTGGAGGTGGAATGGCTTCTTCCGGTGAATCTGTGAAAAAGAAAAGAGGGAGGCCAAGGAAGTATGGTCCTGATAGTGGGACTGTTTCCCTGAGACTCTCTCCCTTGTCTGCCACTGCAAATTCCACCTCAGGAACAGGCACTCCCTCTGAGAAACGGCCCAGAGGACGCCCACCTGGAAGTGGAAGGAAGCAACAGCTTGCCACTTTAGGTGAATGGATGAACAATTCTGCAGGACTGGCCTTTTCACCTCATGTTATCACTGTTGGAGTTGGGGAGGACATTGTAGCAAAGTTGTTCTCATTTTCACAGCAGAGGCCAAGGGCTTTGTGCATCTTAACTGGAACTGGAACAGTTTCTTCTGTCACTCTGCGCCAGCCAGCTTCTACTAGCATCAGTGTTTCTTATGAGGGCCGATTTCAAATATTATGCTTGTCTGGTTCTTACTTGGTTTCTGAAGAAGGTGGACCACGCAGTAGAACAGGTGGCATGAGTGTTTCCCTTTCTAGTCCCGATGGTCATATTATTGGTGGTGGTGTTGCCAGCCTTATAGCTGCAAGCCCGGTGCAGGTGGTAGTATGCAGTTTTGTATATGGAAGCTCTAAGCCAAAGACCAAACAAGTGACCACTGCTACAAAAGATAGCAGTTGCGAGCCTCAGAGTAGTGACAAGTTAGCTTCTCAAGGCAGTGCTCCTAATCAAAACTACTCTTCTCCTGCCACAGGCATGTGGCCTGCTTCATCAAGGCCATTAGAGGTGAAAAGTGCACATCCACACACTGGTATTGACTTGACGCGTGGGTGA 1068 0.4972 MDGREGMGFPGGSAPYYMHHRGGGVGGSGPGTGTPSGFQPPSVFRALSNVSSGSSYSVEAKPQAQSQPQPQPQRGGFGHGINLGSPPDGGGGMASSGESVKKKRGRPRKYGPDSGTVSLRLSPLSATANSTSGTGTPSEKRPRGRPPGSGRKQQLATLGEWMNNSAGLAFSPHVITVGVGEDIVAKLFSFSQQRPRALCILTGTGTVSSVTLRQPASTSISVSYEGRFQILCLSGSYLVSEEGGPRSRTGGMSVSLSSPDGHIIGGGVASLIAASPVQVVVCSFVYGSSKPKTKQVTTATKDSSCEPQSSDKLASQGSAPNQNYSSPATGMWPASSRPLEVKSAHPHTGIDLTRG* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1619 355 MobiDBLite consensus disorder prediction 1 153 - -
Pvu2g1619 355 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 355 - -
Pvu2g1619 355 SUPERFAMILY AF0104/ALDC/Ptd012-like 170 287 - -
Pvu2g1619 355 MobiDBLite consensus disorder prediction 293 355 - -
Pvu2g1619 355 MobiDBLite consensus disorder prediction 118 138 - -
Pvu2g1619 355 Pfam Plants and Prokaryotes Conserved (PCC) domain 172 285 IPR005175 -
Pvu2g1619 355 PRINTS AT-hook-like domain signature 101 111 IPR017956 GO:0003677
Pvu2g1619 355 PRINTS AT-hook-like domain signature 138 149 IPR017956 GO:0003677
Pvu2g1619 355 MobiDBLite consensus disorder prediction 32 73 - -
Pvu2g1619 355 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 355 IPR039605 GO:0003680
Pvu2g1619 355 CDD DUF296 172 284 IPR005175 -
Pvu2g1619 355 ProSiteProfiles PPC domain profile profile. 167 308 IPR005175 -
Pvu2g1619 355 MobiDBLite consensus disorder prediction 293 332 - -
Pvu2g1619 355 Gene3D - 172 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1619 Pvu-Chr2 29904941 29909275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1619 1 355 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 49.231 1.12e-96 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1619 - - gmx:100790569 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1619 2 29904941 29909275 Pvu2g2974 2 45209055 45213550 PCT