Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1612 ATGAAGCCTCGTACTTCATTATGGTTTCTTTCTTTGATTTACACGCTCTCTTTTGTGGCTTCTGACACTGTGCCCTCAAATGAAGTTTGGGCGCTTAGAAGCTTCAAAGAAGCTGTTTATGAAGACCTATATCAAGTTTTGTCCAATTGGGATACGGTAGAAGCAGATCCTTGTAACTGGTTTGGCGTCACTTGCACTATGGTGCGAGATCATGTCATCAAGCTAAACATATCGGGATCATCATTGAAGGGGTTTCTTGCACCAGAGTTGGGGCAACTCGCCTACTTGCAAGAACTAATTTTGCACGGAAACAATCTCATCGGAACAATACCTAGAGAGTTGAGCGAGTTGAAATATCTCAGGGTGTTTGATGTAGGAATGAATCAGTTAACAGGACCAATTCCTCCAGAGTTTGGAAATCTAACTCGAGTTGTGAAAATAAACTTGCAGTCCAACGGGTTGACTGGTAGGCTACCTCCTGAGCTTGGAAACTTGATATTCCTTCAAGAACTTCGGCTGGATAGGAATAGACTTCAAGGACCTATTCCTGCTGGCGATAGCTCAAATTTTGCTTCAAATATGCATGGGATGTATGCGTCGAAGGAGAATGCAACTGGCTTCTGTCGTTCGTCTCAGTTGAAAGTAGCAGACTTCTCATATAATTTTTTAGTTGGTAGTATACCCAAATGCTTGGAGTATCTTCCGAGGTTAAGCTTTCAAGGGAATTGCATCCAGAGCCAGGATTTAAAGCAGCGACCTTCTATACAGTGCGCTGGTGCTTCTCCTGCCAGTGCCAAGAGCCAGCCAGTTGTGAATCCAAGTCACCAACCCGCTGAATATGCGTCCAAGCATCACGGAGGGTCAAAACCTGTTTGGCTTTTGGCTCTAGAAATAGTAACTGGGACTATGGTGGGCTCTCTCTTTCTGGTTGCTGTTTTTGCTGCTTTTCAGAGATGTAACAAAAAATCATCTATCATTATTCCTTGGAAAAAATCTGGAAGCCAGAAAGATCATACGGCAGTATATATAGACCCTGAGATGTTGAAGGATGTGAGAAGGTATAGCAGACAAGAGCTTGAAGTGGCCTGTGAAGACTTCAGCAACATTATTGGGTCCTCACCAGACAGTGTGGTTTACAAGGGAACAATGAAAGGTGGGCCTGAGATTGCTGTAATTTCCCTCTGCATCAAGGAGGAGCATTGGACAGGATATCTTGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGTTAAATCATGAGAATATAGGAAAACTACTTGGTTATTGTAGAGAGGACACTCCATTTACGAGGATGTTGGTTTTTGATTATGCTTCAAATGGGACACTTCATGATCACCTACATTGTTATGAAGAAGGATGTCAATTCTCTTGGACACGGCGTATGAAGATTGCCATAGGCATTGCACGCGGACTCAAGTATTTGCATACCGAAGTGGAGCCTCCATTTACTATCTCAGAGCTGAATTCTAGTGCTGTATACCTTACAGAAGAATTTTCCCCTAAGTTGGTTGATTTTGAAAGTTGGAAGACAATTCTTGAAAGATCAGAAAAGAATTCTGGTTCCATTGGCAGCCAAGGTGCTATCTGTGTCCTTCCAAACTCCCTTGAAGCACGCCATCTTGATACCGAAGGAAACATCTTTGCTTTTGGGGTACTTCTACTAGAGTTACTCAGCGGAAGACCTCCATACTGTAAGGACAAAGGATACTTGGTTGACTGGGCCAAGGACTACCTCGAAAGGCCAGATGAAATGTCGAGCGTGGTGGATCCTGAACTGAAGCATTTTAGACATGAAGACCTCAAAGTGATATGCGAGGTAATAACTCTCTGTATCAACCCTGATAAAACTGCTCATCCATCTATGCGAGAATTGTGTAGCATGCTGGAGAACAGAATTGACACATCAGTAAGCGTGGAGCTTAAGTCGTCATCTTTGGCTTGGGCTGAGCTTGCACTTTTATCTTAA 1992 0.4337 MKPRTSLWFLSLIYTLSFVASDTVPSNEVWALRSFKEAVYEDLYQVLSNWDTVEADPCNWFGVTCTMVRDHVIKLNISGSSLKGFLAPELGQLAYLQELILHGNNLIGTIPRELSELKYLRVFDVGMNQLTGPIPPEFGNLTRVVKINLQSNGLTGRLPPELGNLIFLQELRLDRNRLQGPIPAGDSSNFASNMHGMYASKENATGFCRSSQLKVADFSYNFLVGSIPKCLEYLPRLSFQGNCIQSQDLKQRPSIQCAGASPASAKSQPVVNPSHQPAEYASKHHGGSKPVWLLALEIVTGTMVGSLFLVAVFAAFQRCNKKSSIIIPWKKSGSQKDHTAVYIDPEMLKDVRRYSRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARLNHENIGKLLGYCREDTPFTRMLVFDYASNGTLHDHLHCYEEGCQFSWTRRMKIAIGIARGLKYLHTEVEPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGSIGSQGAICVLPNSLEARHLDTEGNIFAFGVLLLELLSGRPPYCKDKGYLVDWAKDYLERPDEMSSVVDPELKHFRHEDLKVICEVITLCINPDKTAHPSMRELCSMLENRIDTSVSVELKSSSLAWAELALLS* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1612 663 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Pvu2g1612 663 Gene3D Ribonuclease Inhibitor 27 139 IPR032675 -
Pvu2g1612 663 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 661 - -
Pvu2g1612 663 SUPERFAMILY Protein kinase-like (PK-like) 342 638 IPR011009 -
Pvu2g1612 663 ProSiteProfiles Protein kinase domain profile. 364 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1612 663 Gene3D Transferase(Phosphotransferase) domain 1 446 653 - -
Pvu2g1612 663 MobiDBLite consensus disorder prediction 255 286 - -
Pvu2g1612 663 Gene3D Phosphorylase Kinase; domain 1 338 445 - -
Pvu2g1612 663 PANTHER PROTEIN MALE DISCOVERER 2 4 661 - -
Pvu2g1612 663 MobiDBLite consensus disorder prediction 255 275 - -
Pvu2g1612 663 Pfam Protein tyrosine and serine/threonine kinase 368 636 IPR001245 GO:0004672|GO:0006468
Pvu2g1612 663 Gene3D Ribonuclease Inhibitor 140 258 IPR032675 -
Pvu2g1612 663 SUPERFAMILY L domain-like 26 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1612 Pvu-Chr2 29851729 29856777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1612 1 643 Receptor kinase-like Gene Family AT2G35620 28.290 9.24e-55 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pvu2g1612 PK_Tyr_Ser-Thr 1.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1612 - - gmx:100794714 1216.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1612 2 29851729 29856777 Pvu2g2964 2 45154489 45159287 PCT