Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1596 ATGGCGACGACAAGGTCGTCTCCGAGCCCTTCCTCTGAGGACATCGTCGATTCCACGCCGCTTCTGGCCAATTCTGGCGGCTCCTCAGGGGAGCTCACCACAGGGCGTCGATTTGTTCGGCGGCAGCGGCTCCGGCAGGCGGCGCGGTTCCTCAGGCAGGCGAGCGGGCGCAGGATGATGCGCGAGCCGTCGATGCTGGTCCGGGAGGCGGCGGCGGAACAATTGGAGGAGAGGCAGAGCGATTGGGCGTATTCGAAGCCGGTGGTTGTTCTGGACATCGTTTGGAACTTCGCGTTCGTGATTGTAGCGGGGACCGTTTTGGTTTTGAGCGCGAGCGAAGCGCCGGGGATGCCTCTGAGGTTGTGGATTTTGGGGTACGCTTTGCAATGCATTCTTCACATGGTTTGCGTTTGCGTAGAGTATAGAAGAAGGAGGAGGAGCCACCGCGCCACCGCGTCGGTTTCAGTGCAGGACAGAATTGGGAGCAGCAGTGGAAATTTGAGTTCATCTTCGAGGGAGGCTTCTTCTTCAGGCTCCGTGCAGTATGTGTCGCTGGAGCAACTCGATGAGGAGGGTACTAGTGTTGCAAAGCACTTGGAATCAGCCAATACCATGTTTTCATTTGTTTGGTGGATTATTGGATTCTACTGGGTATCAGCTGGTGGTCAAGAATTAGCCCAAGAGTCTCCTCAGCTTTACTGGCTATGCATAATTTTCCTGGGTTTTGATGTTTTCTTTGTTGTTTTCTGTGTTGCACTGGCGTGTATCATTGGTATCGCTGTTTGCTGTTGTCTTCCATGTATCATTGCACTTCTATACGCAGTTGCAGACCAAGAAGGAGCATCAAAGGAAGACATTGAGCAGTTGTCAAAATTTAAATTCCGGAGAATTGAAAGCAATGAGAAACATACCGGAACTATACAAGGACCTGTTGGAGGAGTAATGACTGAATGCCAGGCTGAGTCACCTATCGAACATGTTCTTGCCGAGGAGGATGCGGAATGTTGCATCTGCCTTTCCTCTTATGACGATGGGGTTGAGTTAAGAGAACTTCCTTGTGGTCACCATTTTCACTGTGTCTGTGTGGATAAATGGCTGTACATTAATGCCACCTGCCCTCTCTGCAAGTATAACATCTTAAAAAGTAGCAACATCAGTCAAGAGGAGGTGTAG 1173 0.5107 MATTRSSPSPSSEDIVDSTPLLANSGGSSGELTTGRRFVRRQRLRQAARFLRQASGRRMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNFAFVIVAGTVLVLSASEAPGMPLRLWILGYALQCILHMVCVCVEYRRRRRSHRATASVSVQDRIGSSSGNLSSSSREASSSGSVQYVSLEQLDEEGTSVAKHLESANTMFSFVWWIIGFYWVSAGGQELAQESPQLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFRRIESNEKHTGTIQGPVGGVMTECQAESPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCVCVDKWLYINATCPLCKYNILKSSNISQEEV* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1596 390 PANTHER TARGET OF ERK KINASE MPK-1 4 390 - -
Pvu2g1596 390 SMART ring_2 335 375 IPR001841 -
Pvu2g1596 390 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 390 - -
Pvu2g1596 390 MobiDBLite consensus disorder prediction 1 32 - -
Pvu2g1596 390 ProSiteProfiles Zinc finger RING-type profile. 335 376 IPR001841 -
Pvu2g1596 390 SUPERFAMILY RING/U-box 324 382 - -
Pvu2g1596 390 CDD RING-H2_RNF111_like 334 378 - -
Pvu2g1596 390 MobiDBLite consensus disorder prediction 156 175 - -
Pvu2g1596 390 Pfam Ring finger domain 334 376 IPR001841 -
Pvu2g1596 390 MobiDBLite consensus disorder prediction 1 33 - -
Pvu2g1596 390 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 315 385 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1596 Pvu-Chr2 29668345 29673641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1596 6 383 C3H Transcription Factor Family AT1G68070 49.738 4.14e-118 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1596 - - gmx:100790497 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2182 3 42668758 42673555 Pvu2g1596 2 29668345 29673641 PCT