Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1595 ATGGGTAAGGCATCCAAATGGTTTCGCGGCCTTTTCGGTTTCAAAAGGCAAGACTCGCCGTCCGCCGCCGCTCCCAAACCGCCCAAGGAGAAACGGCGGTGGAGCTTCGTCAAGTCCTACCGAGAAAAGGACCATTCCGCCGTCAACCACCACGCACCACCCACCAGCGGAGGCCATTCCTCGGGACACGTGGAAAGCGCTGATCCCAACCTCGCACCACTCGCCGCTGTCACCGTCGTCGGAGGCGTTTCTCGAGAAGAATGGGCAGCTGTTAAGATTCAGGCCGCGTTTCGAGGCTCTTTGGCAAGGAAAGCCCTTGGAGCGTTAAAAGGATTGGTGAAGCTTCAGGCATTGGTGAGGGGTGAGATTGAGAGGAAGCGCACGTCAGAATGGCTGCAAAGAGTACAAACACTCTTACGTGTTCAGGCCCAATTCCGTGCTGGGCGGGCCCAAATTTTGCACGGCCCATATTGGAATGCAAACTCATCCACTCCCCTCCTCCATGTGAGTCCAGCAAAACCAGACAAATTTGAAAGCCCCATCAGATCCGAGAGCATGAAATATGATCACTCACCATCATTACTCAAGAGAAACAGCTCAAAATCCCGCATGCAAATCAATGAATCATGGCATCAACGAAGATCGTGGTCAAGAGGTTGTAGCCTGGACGAAGAAAGATGTTTCAGGATGCTAGAAAATGATTCTGTAAAACCACAGATGACAACATCAAAGGGTAGAAACCAGTTTTACTCCCCAAGCCATGGTTTGGTCTGTGAAGTTGAGTCTTACAGCCCTCTGAAAATGAAGGAGGAGGTTGAGGAGAACTCATGGTGTGGTGGTGAGAATAGTCCTCGTACTTTGTCTGCCTCTTCTAGAAATGGTGGGTCCAAAAGAAGCCCTTTTACTCCTAGCAAGAGTGATGGGTCAAAGAGCCATGGAAGTGGTTATTCTGAACCTGAGTATCCGAGTTACATGGCATACACTGAATCCTCAATGGCAAAGGTAAGATCCGCGAGTGCTCCAAAGCAGAGGCCCCAATATGAGAGGTCTAGTTCTTCTTCTAACAGATACTCGGTTCATGATCATGGATTTGGTGACTCGAAATTCGCCACGCAAAGGCTTGCTGCATTACACGCAAACTTCACTAACAAAGCTTACCCTGGTTCTGCTCGTTTGGATAGGCATAAATACTCACATACGTAA 1203 0.4963 MGKASKWFRGLFGFKRQDSPSAAAPKPPKEKRRWSFVKSYREKDHSAVNHHAPPTSGGHSSGHVESADPNLAPLAAVTVVGGVSREEWAAVKIQAAFRGSLARKALGALKGLVKLQALVRGEIERKRTSEWLQRVQTLLRVQAQFRAGRAQILHGPYWNANSSTPLLHVSPAKPDKFESPIRSESMKYDHSPSLLKRNSSKSRMQINESWHQRRSWSRGCSLDEERCFRMLENDSVKPQMTTSKGRNQFYSPSHGLVCEVESYSPLKMKEEVEENSWCGGENSPRTLSASSRNGGSKRSPFTPSKSDGSKSHGSGYSEPEYPSYMAYTESSMAKVRSASAPKQRPQYERSSSSSNRYSVHDHGFGDSKFATQRLAALHANFTNKAYPGSARLDRHKYSHT* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1595 400 Pfam IQ calmodulin-binding motif 88 105 IPR000048 GO:0005515
Pvu2g1595 400 ProSiteProfiles IQ motif profile. 86 114 IPR000048 GO:0005515
Pvu2g1595 400 MobiDBLite consensus disorder prediction 330 359 - -
Pvu2g1595 400 Gene3D - 83 138 - -
Pvu2g1595 400 ProSiteProfiles IQ motif profile. 110 137 IPR000048 GO:0005515
Pvu2g1595 400 PANTHER CALMODULIN BINDING PROTEIN IQD22 1 397 - -
Pvu2g1595 400 MobiDBLite consensus disorder prediction 39 65 - -
Pvu2g1595 400 SMART iq_5 85 107 IPR000048 GO:0005515
Pvu2g1595 400 MobiDBLite consensus disorder prediction 275 359 - -
Pvu2g1595 400 PANTHER IQ-DOMAIN 5-RELATED 1 397 - -
Pvu2g1595 400 MobiDBLite consensus disorder prediction 279 313 - -
Pvu2g1595 400 Pfam Protein of unknown function (DUF4005) 283 360 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1595 Pvu-Chr2 29657311 29660559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1595 1 53 IQD Protein Family AT4G23060 48.387 2.88e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1595 - - vra:106777320 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2184 3 42681825 42685387 Pvu2g1595 2 29657311 29660559 PCT