Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1594 ATGCGCATTGCGCACCTCACAACCAGAGTTCTGGCCAATTCAATGAACGGCGGCGAGGAGAGAGAAACTGCAGCGTTCCGAGCTCTGGCGGATCGGTGCCGGAGCCTCGAGGAGAAGCAGGCCAAGCTGAGGGAGGAATTCGATGAGCTACTGCAGAAGAAGCTCACAGTCAGGCACGATAACGATGACAATAACGAGGTCATTGCTGATTCAACAACCCTCGGTTTTCCCTCCGGTTACTTCTTATCCGGAAGTCCCTACGCAACCGTGTTGAAATGCATGGGCCACGCCGTTCACGTCCTCAGAGTTCCCTCCGCCGAGATCGTATACTGGAATCAGGCGGCCGAAACTCTGTATGGATGGAAAGACTACGAAATCATTGGCCAAAGAGTAGCTAAAGTCCTAATTGCTGAGGACAATTACGCATCTCTACAAAAAATTCTGGAAAGGGTGGTTTCAGGAGTTCCATGGTCTGGGAAGTTTCCTTTCAAGAAGAAATCTGGTGAAGTAATTATGGCATTAGTAACAAAAACTCCTCTTTATGAGGATGGTGAGCTTGTTGGTGTTATAACTGTTTCAAGTGATGCGGCTATAGTAAAATCTACAAATTCAGAAAATCGAACATACAAATCTGGTAACAATAGCCAATCTGGAGTACAGAGGTTAAACTTTAAAAGAATTCAGTGGCCTCCACGACCAACGATTGCACCAATGCCACAGATTGCTTCATCTGTTTCCAATCTGGCATCAAAGCTTCTCCCACTGCTGCATATTACTGATGACACAGTTTCCGGGAACACTTCAACAGGTGATGAAAAGCTAGAGAAGCGTGACATATATGAAACAAAACCTCATTCCAGACATCTCCGTAAAGGAAACACAATTGTCACAGAGGCCTCCGAGAAGAATGAGTCTACAGCAGAATTTGGTCAACCTTCTAAAATTGCAGCCAAGCTTCAAACTGGGGATGTTGTTAATGGAGCAGACAAAGAACAAAATCTTCAAAAATGTAATTCTTCACCTGCAATGAAGAGAGCAGATACAACAGCCTGTGCGTGTAGAGCTTCCACTGTTTCCAAAGATTATTCTGAGGCTACGACTATGGTGACAGGAGATGAAGTGCAAAAGCAGCAAGAAGGGTCGCAACTGCCAAGTTTGAGGGAGAGTATAGACAAGCATGAAAGTTTGTCTAGCACAGGGGATAATGAGTCAAACTCTGTTTCAGAGTGTGAAATCCATTGGGAAGAACTTCAATTAAGAGAGCAGATTGGACAAGGTTCTTATGCAATAGTTTATCATGGAATTTGGAATGGATCGGATGTTGCAGCCAAGGTTTATTTTGGGAACGGATACACAGAGGAGACTTTACAGGACTACAGAAAAGAGATTGATATAATGAAGAGATTGAGACACCCTAATGTATTACTTTTCATGGGAGCAGTATATTCACCGGAAAGGCTTGCCATTGTTACAGAGTTATTACCTAGGGGAAGCCTTTTCAAAAATCTACATAGGAACAATCAGACATTAGACATCAGAAGACGTCTAAGGATGGCTCTTGATGTAGCTAAAGGAATGAATTATCTTCATCACAGAAATCCTCCAATTGTGCATAGAGATCTGAAGTCTTCCAACCTGCTTGTAGATAAAAACTGGACTGTAAAGGTTGGAGATTTTGGCCTGTCTAGGTTGAAGGATGCAACATTATTGAATACGAAATCTGGGAGAGGCACCCCTCAATGGATGGCCCCTGAAGTGCTTAGAAATGAACCTTCAAATGAGAAGTCTGATGTGTTCAGTTTTGGTGTCATCCTCTGGGAACTAATGACTCATTCGATTCCGTGGAAAAATTTGAATTCCTTACAGGTTGTTGGAGTCGTAGGCTTTGTGGACAGACGACTGGACCTTCCGGATGACCTTGATCCCTATGTTGCCTCAATCATCAATGATTGCTGGCGAAGTGATCCAGAGAAACGCCCATCATTTGAAGAGCTGATCCAGAGAACGTTGTTCCTTGTCAACAGAGTAACAGCAGTGTCAATTAGGAGAATTGCAGAATCCTAA 2064 0.437 MRIAHLTTRVLANSMNGGEERETAAFRALADRCRSLEEKQAKLREEFDELLQKKLTVRHDNDDNNEVIADSTTLGFPSGYFLSGSPYATVLKCMGHAVHVLRVPSAEIVYWNQAAETLYGWKDYEIIGQRVAKVLIAEDNYASLQKILERVVSGVPWSGKFPFKKKSGEVIMALVTKTPLYEDGELVGVITVSSDAAIVKSTNSENRTYKSGNNSQSGVQRLNFKRIQWPPRPTIAPMPQIASSVSNLASKLLPLLHITDDTVSGNTSTGDEKLEKRDIYETKPHSRHLRKGNTIVTEASEKNESTAEFGQPSKIAAKLQTGDVVNGADKEQNLQKCNSSPAMKRADTTACACRASTVSKDYSEATTMVTGDEVQKQQEGSQLPSLRESIDKHESLSSTGDNESNSVSECEIHWEELQLREQIGQGSYAIVYHGIWNGSDVAAKVYFGNGYTEETLQDYRKEIDIMKRLRHPNVLLFMGAVYSPERLAIVTELLPRGSLFKNLHRNNQTLDIRRRLRMALDVAKGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRLKDATLLNTKSGRGTPQWMAPEVLRNEPSNEKSDVFSFGVILWELMTHSIPWKNLNSLQVVGVVGFVDRRLDLPDDLDPYVASIINDCWRSDPEKRPSFEELIQRTLFLVNRVTAVSIRRIAES* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1594 687 MobiDBLite consensus disorder prediction 370 385 - -
Pvu2g1594 687 ProSiteProfiles Protein kinase domain profile. 417 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1594 687 MobiDBLite consensus disorder prediction 370 405 - -
Pvu2g1594 687 PANTHER SERINE-THREONINE PROTEIN KINASE 330 673 - -
Pvu2g1594 687 PANTHER SERINE-THREONINE PROTEIN KINASE 28 320 - -
Pvu2g1594 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 536 548 IPR008271 GO:0004672|GO:0006468
Pvu2g1594 687 ProSiteProfiles PAS repeat profile. 105 155 IPR000014 -
Pvu2g1594 687 CDD PAS 107 195 IPR000014 -
Pvu2g1594 687 Gene3D Phosphorylase Kinase; domain 1 405 494 - -
Pvu2g1594 687 Pfam PAS fold 104 191 IPR013767 GO:0006355
Pvu2g1594 687 Pfam Protein tyrosine and serine/threonine kinase 417 667 IPR001245 GO:0004672|GO:0006468
Pvu2g1594 687 TIGRFAM sensory_box: PAS domain S-box protein 106 195 IPR000014 -
Pvu2g1594 687 PRINTS Tyrosine kinase catalytic domain signature 491 504 IPR001245 GO:0004672|GO:0006468
Pvu2g1594 687 PRINTS Tyrosine kinase catalytic domain signature 530 548 IPR001245 GO:0004672|GO:0006468
Pvu2g1594 687 PRINTS Tyrosine kinase catalytic domain signature 577 587 IPR001245 GO:0004672|GO:0006468
Pvu2g1594 687 PRINTS Tyrosine kinase catalytic domain signature 596 618 IPR001245 GO:0004672|GO:0006468
Pvu2g1594 687 PRINTS Tyrosine kinase catalytic domain signature 640 662 IPR001245 GO:0004672|GO:0006468
Pvu2g1594 687 CDD STKc_MAP3K-like 423 668 - -
Pvu2g1594 687 Coils Coil 26 53 - -
Pvu2g1594 687 SUPERFAMILY Protein kinase-like (PK-like) 405 676 IPR011009 -
Pvu2g1594 687 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 53-RELATED 28 320 - -
Pvu2g1594 687 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 53-RELATED 330 673 - -
Pvu2g1594 687 Gene3D PAS domain 100 200 - -
Pvu2g1594 687 Gene3D Transferase(Phosphotransferase) domain 1 496 677 - -
Pvu2g1594 687 ProSitePatterns Protein kinases ATP-binding region signature. 423 444 IPR017441 GO:0005524
Pvu2g1594 687 SUPERFAMILY PYP-like sensor domain (PAS domain) 105 195 IPR035965 -
Pvu2g1594 687 SMART serkin_6 417 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1594 Pvu-Chr2 29644994 29651836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1594 77 668 MAP Kinase Kinase Kinase AT3G06640 39.058 6.50e-141 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pvu2g1594 PK_Tyr_Ser-Thr 1.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1594 - - vra:106777922 1182.16