Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1593 ATGGCTGCTTCAACAATGGCTCTCTCTTCATCATCATTGGCTGGCCAAGCAATCAAGCTTTCCCCCTCCACCCCTGACCTTTCCACTGGAAGGATTTCCATGAGGAAAACAGCTTCTAAGTCTGTTTCCTCTGGAAGCCCATGGTACGGCCCAGACCGTGTCAAGTATTTGGGCCCATTTTCCGGTGAGGCACCATCTTACCTCACTGGTGAATTCCCAGGTGATTATGGTTGGGACACTGCTGGGCTTTCTGCTGACCCTGAGACTTTTGCTAAAAACCGTGAACTTGAAGTCATCCACTCCAGATGGGCTATGTTGGGAGCTTTGGGCTGTGTTTTCCCCGAACTCTTGTCCCGTAACGGTGTGAAGTTTGGCGAGGCTGTGTGGTTTAAGGCTGGATCTCAGATATTCAGTGAGGGTGGACTTGACTACTTGGGCAACCCAAGCCTGGTCCATGCACAGAGCATTCTTGCTATCTGGGCCACCCAAGTTCTCTTAATGGGTGCCGTTGAGGGTTACCGTATTGCCGGTGGGCCTCTTGGTGAGGTGACTGACCCAATCTACCCAGGTGGAAGCTTCGACCCATTGGGCCTTGCTGATGACCCAGAAGCTTTTGCTGAGTTGAAGGTGAAAGAGCTCAAAAACGGTAGATTAGCCATGTTCTCCATGTTTGGTTTCTTTGTTCAAGCCATTGTCACCGGAAAGGGACCTTTGGAAAACCTTGCAGACCACCTTGCTGACCCAGTCAACAACAATGCCTGGGCATATGCCACAAACTTTGTCCCCGGAAAGTGA 795 0.5094 MAASTMALSSSSLAGQAIKLSPSTPDLSTGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVLLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1593 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
Pvu2g1593 264 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
Pvu2g1593 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC 1 264 - -
Pvu2g1593 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
Pvu2g1593 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
Pvu2g1593 264 MobiDBLite consensus disorder prediction 26 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1593 Pvu-Chr2 29635948 29637207 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1593 1 264 Chloroplast and Mitochondria Gene Families AT2G34430 87.218 9.48e-171 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1593 K08912 - gmx:100800351 523.087