Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1586 ATGAGGCACCCACTCTACCGCGGAATCCGTTCCCGGGGAAGAAAATGGGTCTCCGAAATCCGCGAGCCACGCAAGGCCTCCCGCATATGGCTCGGCACCTTCCCCACGCCGGAAATGGCCGCCACCGCCTACGACGTCGCAGCATTGGCCTTGAAAGGCGACGCCGCCGTTCTCAACCTCCCTCACTCCGTTACCAAGTATCAAATCCCTGCAACCAACTCTCCTGCGGATATCCGCACCGCTGCCTCCGCTGCAGCCGCAATGATGAAGTCTGAAACTGAAGCTTCCCACAACATTGCATCGCAAACTGAAGCTACCCACACTAATTATGCGTCGACTTGGTGGTTTGAAAATAATTTCTTGGACGAGGAAGCCATTTTCGGCATGCCAAGTCTGCTGGTGGACATGGCCGGCGGAATGCTTCTGTCGCCTCCCAGAATGAGCCCGCCACCGTCTGATAACTCGCCGGAGAAACAAGCTGCAGAAACTTTGTGGAGTTATTTTTGA 507 0.5562 MRHPLYRGIRSRGRKWVSEIREPRKASRIWLGTFPTPEMAATAYDVAALALKGDAAVLNLPHSVTKYQIPATNSPADIRTAASAAAAMMKSETEASHNIASQTEATHTNYASTWWFENNFLDEEAIFGMPSLLVDMAGGMLLSPPRMSPPPSDNSPEKQAAETLWSYF* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1586 168 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 2 168 - -
Pvu2g1586 168 ProSiteProfiles AP2/ERF domain profile. 5 61 IPR001471 GO:0003700|GO:0006355
Pvu2g1586 168 Pfam AP2 domain 4 53 IPR001471 GO:0003700|GO:0006355
Pvu2g1586 168 Gene3D AP2/ERF domain 5 63 IPR036955 GO:0003700|GO:0006355
Pvu2g1586 168 SMART rav1_2 5 67 IPR001471 GO:0003700|GO:0006355
Pvu2g1586 168 CDD AP2 4 63 IPR001471 GO:0003700|GO:0006355
Pvu2g1586 168 SUPERFAMILY DNA-binding domain 5 63 IPR016177 GO:0003677
Pvu2g1586 168 PANTHER ETHYLENE RESPONSE FACTOR 2 168 - -
Pvu2g1586 168 MobiDBLite consensus disorder prediction 144 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1586 Pvu-Chr2 29572213 29572719 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1586 2 167 AP2-EREBP Transcription Factor Family AT5G52020 51.136 1.50e-45 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu2g1586 AP2 3e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1586 - - gmx:100811020 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1586 2 29572213 29572719 Pvu2g1586 2 29572213 29572719 ECH
Pvu3g2193 3 42784293 42784829 Pvu2g1586 2 29572213 29572719 PCT