Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu2g1586 | ATGAGGCACCCACTCTACCGCGGAATCCGTTCCCGGGGAAGAAAATGGGTCTCCGAAATCCGCGAGCCACGCAAGGCCTCCCGCATATGGCTCGGCACCTTCCCCACGCCGGAAATGGCCGCCACCGCCTACGACGTCGCAGCATTGGCCTTGAAAGGCGACGCCGCCGTTCTCAACCTCCCTCACTCCGTTACCAAGTATCAAATCCCTGCAACCAACTCTCCTGCGGATATCCGCACCGCTGCCTCCGCTGCAGCCGCAATGATGAAGTCTGAAACTGAAGCTTCCCACAACATTGCATCGCAAACTGAAGCTACCCACACTAATTATGCGTCGACTTGGTGGTTTGAAAATAATTTCTTGGACGAGGAAGCCATTTTCGGCATGCCAAGTCTGCTGGTGGACATGGCCGGCGGAATGCTTCTGTCGCCTCCCAGAATGAGCCCGCCACCGTCTGATAACTCGCCGGAGAAACAAGCTGCAGAAACTTTGTGGAGTTATTTTTGA | 507 | 0.5562 | MRHPLYRGIRSRGRKWVSEIREPRKASRIWLGTFPTPEMAATAYDVAALALKGDAAVLNLPHSVTKYQIPATNSPADIRTAASAAAAMMKSETEASHNIASQTEATHTNYASTWWFENNFLDEEAIFGMPSLLVDMAGGMLLSPPRMSPPPSDNSPEKQAAETLWSYF* | 169 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu2g1586 | 168 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 2 | 168 | - | - | |
Pvu2g1586 | 168 | ProSiteProfiles | AP2/ERF domain profile. | 5 | 61 | IPR001471 | GO:0003700|GO:0006355 | |
Pvu2g1586 | 168 | Pfam | AP2 domain | 4 | 53 | IPR001471 | GO:0003700|GO:0006355 | |
Pvu2g1586 | 168 | Gene3D | AP2/ERF domain | 5 | 63 | IPR036955 | GO:0003700|GO:0006355 | |
Pvu2g1586 | 168 | SMART | rav1_2 | 5 | 67 | IPR001471 | GO:0003700|GO:0006355 | |
Pvu2g1586 | 168 | CDD | AP2 | 4 | 63 | IPR001471 | GO:0003700|GO:0006355 | |
Pvu2g1586 | 168 | SUPERFAMILY | DNA-binding domain | 5 | 63 | IPR016177 | GO:0003677 | |
Pvu2g1586 | 168 | PANTHER | ETHYLENE RESPONSE FACTOR | 2 | 168 | - | - | |
Pvu2g1586 | 168 | MobiDBLite | consensus disorder prediction | 144 | 168 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu2g1586 | Pvu-Chr2 | 29572213 | 29572719 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu2g1586 | 2 | 167 | AP2-EREBP Transcription Factor Family | AT5G52020 | 51.136 | 1.50e-45 | 147 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Pvu2g1586 | AP2 | 3e-09 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu2g1586 | - | - | gmx:100811020 | 249.98 |