Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1580 ATGGCTCATTTGGTTTACGGTGAAACTCCATCTTTTGGAGCTTCACACCATGGACAGGCTCAGCAAACTATTTCGTTTCCAACCACTGCAACTTCCTTAAAGATTCTGCTCTTACATGGCAACTTGGAAATATGGGTCAACGAGGCCAGAAACCTTCCCAACATGGACATGTTTCACAAGAAAACGGGAGAAATGGTTTCCATGTTGTCCCGAAGACTTGGCGGCAAAATCGAAGGCGTCATGTCCAAAACTGGAACCAGTGATCCCTATGTTACAGTGTCTGTGGCGGATGCTGTGATTGCCAGAACTTTTGTCATCAGAAACATGGAGAACCCCGTTTGGACGCAGCGTTTCAATGTCCCCGTTGCCCACCTTGCTTCTGAAGTCCACTTCGTTGTAAAGGACAGTGATATCGTGGGTTCCCAGATTATTGGAGCAGTGGGTATTCCAGTGGAAGCGTTATGTAGTGGCGCAAGAGTTGATGGCTTTTTCCCCATCATTAGTACTAATGGAAAACCATGTAAAGGTGGAGCAATGTTGAGTTTATCCATTCAGTACACCCCTGTTGAAAAGGTGCCTCTTTATAGCCATGGAGTAGGTGCTGGTCCTGATTATCAAGGGGTACCTGACACATACTTTCCCCTTAGGAAAGGTGGAAAAGTTACACTTTATCAAGATGCTCATGTTCATGAAGGGTGCCTTCCCAGTTTGAAGGTGGATGGGGATGTGAATTATAAGCATGAAAGTTGTTGGCACCACATCTTTGATGCAATAAGTAAGGCTCAACGATTGGTTTACATTGTTGGGTGGTCTGTGTACTACAATGTTAGTCTCATTCGGGATATGGGTGATGGAAAGGCTCACACTTTAGGTGACCTTCTCAAAGCTAAATCACGGGAAGGTGTGAGAGTGTTGCTCCTTGTGTGGGATGATCCCACTTCTAGAAGCATTCTTGGATACAATACGGTTGGACATATGAAAACCCACGATGAGGACACTCACCAGTTTTTCAAGCACTCTTCGGTACAGGTGCTTCTGTGCAAACGAGCTGGTGGAAAGGGACATAGCTTTCTCAAAACGCAGGAAGCTGGAACAATCTATAGCCATCATCAGAAGACAGTGATTGTAGATGCTGACGCAGATCACAATAAAAGAAAGATAGTAGCTTTCATCGGAGGTCTTGATTTATGTGCGGGTCGATATGATACCCCAAACCATTCCCTTTTTAGGACTTTGCAGACAACACACAAAAATGACTATTATAATAATAACTTTGAGGGACCTATCACTGACTGTCCAAGACAACCGTGGCATGATTTGCATTCCAAAGTTGATGGTCCAGCAGCATATGACATCCTCACCAATTTCGAGGAGCGTTGGTTGAAGGCTTTAAAAATGCATAGATTGCGAACGATGAAAAGTTCGCTTGATGATTCATTGCTTAAAATTGATAGAATCGATGACATTGTTGGCATTGATAAAGTTTCCTGCCAAAATGAAGATGACCAGGAGATTTGGCATACCCAGGTCTTCCGATCAATTGATTCCAATTCTGTGAAAGGATTTCCAAAGCAATCACAAGATGCTATAAGAAGGAACTTGGTTTGTGGAAAGAATGTGCTAATAGACATGAGCATACATTCAGCTTATGTCAAGGCAATTCGAGCAGCCCAAAAGTTCATCTATATTGAGAACCAATACTTTCTTGGCTCATCATATAATTGGGATTCTTACATAAACCTTGGTGCAAACAACTTAATTCCAATGGAAATTGCATTGAAAATAGCCAGCAAAATCAAACAGCATGAGAGATTCTCTGTGTATATTGTCATTCCTATGTGGCCTGAAGGAGTGCCTAAAAGTAAATTGACTCAGCGGATTCTCTTTTGGCAGTTCAAAACCATGCAAATGATGTATGAAACGGTTTACAAGGCCTTACAGGAGACTGGGCTTGACAATCAGTATGAGCCACAGGACTACTTGAATTTCTTTTGCCTTGGTAATCGTGAGATCCCTGAAAACGAACATGTTACAAAAACTACTAGAGAAAACACACCTCAGGCACTCACTAAAAAGAACCGAAGATTCATGATTTATGTTCATTCAAAAGGAATGATAGTGGATGATGAATATGTGTTACTGGGGTCTGCAAACATTAACCAGAGATCCATGGAAGGCACTAGAGATACAGAGATAGCAATGGGAGCATATCAGCCTAATCATACTTGGGCAAAGAAGCAATCTAAACCTCGTGGACAGGTGTATGGTTATAGAATGTCACTGTGGAGCGAACATATAGGAAGTGTGGAAGCATGTTTTGAGGAACCAGAGAGGCTTGAGTGTGTAAGGCGGATAAAGTCATTGAGTGAGTCTAACTGGAGACAGTATGCAGCAGATGAGGTAACTGAAATGAAAAGCCATTTATTAAAATATCCTCTTGAAGTTGATTCAAAGGGCAAGGTGAAGCCTCTTTCTGGCTGTGAGACATTCCCAGATGTTGGTGGGAACATAAGTGGCAGTTTCAAAGGACCCCAAGAAAATCTCACCATCTGA 2553 0.4246 MAHLVYGETPSFGASHHGQAQQTISFPTTATSLKILLLHGNLEIWVNEARNLPNMDMFHKKTGEMVSMLSRRLGGKIEGVMSKTGTSDPYVTVSVADAVIARTFVIRNMENPVWTQRFNVPVAHLASEVHFVVKDSDIVGSQIIGAVGIPVEALCSGARVDGFFPIISTNGKPCKGGAMLSLSIQYTPVEKVPLYSHGVGAGPDYQGVPDTYFPLRKGGKVTLYQDAHVHEGCLPSLKVDGDVNYKHESCWHHIFDAISKAQRLVYIVGWSVYYNVSLIRDMGDGKAHTLGDLLKAKSREGVRVLLLVWDDPTSRSILGYNTVGHMKTHDEDTHQFFKHSSVQVLLCKRAGGKGHSFLKTQEAGTIYSHHQKTVIVDADADHNKRKIVAFIGGLDLCAGRYDTPNHSLFRTLQTTHKNDYYNNNFEGPITDCPRQPWHDLHSKVDGPAAYDILTNFEERWLKALKMHRLRTMKSSLDDSLLKIDRIDDIVGIDKVSCQNEDDQEIWHTQVFRSIDSNSVKGFPKQSQDAIRRNLVCGKNVLIDMSIHSAYVKAIRAAQKFIYIENQYFLGSSYNWDSYINLGANNLIPMEIALKIASKIKQHERFSVYIVIPMWPEGVPKSKLTQRILFWQFKTMQMMYETVYKALQETGLDNQYEPQDYLNFFCLGNREIPENEHVTKTTRENTPQALTKKNRRFMIYVHSKGMIVDDEYVLLGSANINQRSMEGTRDTEIAMGAYQPNHTWAKKQSKPRGQVYGYRMSLWSEHIGSVEACFEEPERLECVRRIKSLSESNWRQYAADEVTEMKSHLLKYPLEVDSKGKVKPLSGCETFPDVGGNISGSFKGPQENLTI* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1580 850 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 365 400 IPR001736 GO:0003824
Pvu2g1580 850 PIRSF PLD_plant 27 850 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pvu2g1580 850 ProSiteProfiles C2 domain profile. 16 164 IPR000008 -
Pvu2g1580 850 Pfam C2 domain 40 166 IPR000008 -
Pvu2g1580 850 Gene3D Endonuclease Chain A 237 482 - -
Pvu2g1580 850 Gene3D Endonuclease Chain A 503 749 - -
Pvu2g1580 850 SMART pld_4 365 400 IPR001736 GO:0003824
Pvu2g1580 850 SMART pld_4 696 723 IPR001736 GO:0003824
Pvu2g1580 850 SUPERFAMILY Phospholipase D/nuclease 528 768 - -
Pvu2g1580 850 CDD C2_plant_PLD 36 187 - -
Pvu2g1580 850 PANTHER PHOSPHOLIPASE D 8 850 IPR015679 -
Pvu2g1580 850 Pfam Phospholipase D Active site motif 697 723 IPR001736 GO:0003824
Pvu2g1580 850 Pfam Phospholipase D Active site motif 366 400 IPR001736 GO:0003824
Pvu2g1580 850 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 8 850 - -
Pvu2g1580 850 SMART C2_3c 41 163 IPR000008 -
Pvu2g1580 850 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 696 723 IPR001736 GO:0003824
Pvu2g1580 850 Gene3D C2 domain 35 183 IPR035892 -
Pvu2g1580 850 SUPERFAMILY Phospholipase D/nuclease 206 466 - -
Pvu2g1580 850 Pfam Phospholipase D C terminal 771 840 IPR024632 -
Pvu2g1580 850 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 189 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1580 Pvu-Chr2 29453177 29458056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1580 32 850 Phospholipase D Gene Family (Wang group) AT2G42010 66.509 0.0 1207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1580 K01115 - gmx:100786241 1539.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1580 2 29453177 29458056 Pvu2g1580 2 29453177 29458056 ECH