Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1571 ATGGAACTTGCATTGCCTCTTGCTCTTATTTTCATGCTAATTAGTATATGTCAGACTTCAGCACATCGAAATCCAGAATTCGTGAAAGCAATAAAGGAACATTATTTTCCAACTCAGGAAATTGATGTTCCAAACAGCTTGTTGACTTACATTGTTCGCGTTAAAAAGGGTGATGAGGGTGGGGATGGTGATTCTCTTGGGTCTATGGACCTCCATAGTTGGTACCATTCGCTTCTCCCTTCCAGTACCAGATCCGATCAGAAGCAGAACCGCATTACTTTCTTATACCGCAACGTGATGGATGGATTTTCCGTGGAATTGACCCCAGAAGAAGCCGATGCTCTTCAAGAGAAGGAGGAGGTTGTGTCAGTACGTCCTGAAAGGACCTTTTCATTACACACAACTCACACTCCATCGTTCTTGGGGTTGCAACAAGGACTGGGAGGATTATGGAGCAATTCCGATTCTGGCAAAGGCATCATAATTGGAATTCTGGACACTGGCATAACCCCTGATCACCCTTCTTTCTCTGACGAAGGAATGCCATTTCCACCAGCAAAATGGAAGGGGCTCTGTGAATTCTCAGGACGGAGGACTTGCAACAACAAGCTCATTGGTGCAAGACATTTTATCAAAAGCTCAAACTCATCCCTTCCACTGGATCATGTTGGACATGGGACTCACACAGCCAGCACAGCCACAGGAAGGTTTGTGCAGGGTGCTAATGTCTTTGGCAATGCTAAGGGTACAGCGGTTGGCATGGCACCTGATGCACACTTAGCAATATACAAGGTATGTGACATCTTTGGTTGTTCAGAAAGTGCGATCCTAGCTGGAATGGACACTGCCATAGAGGATGGTGTGGATGTACTTTCTCTCTCCATTGGGGGACGCTCTGGTCCTTTATTTGACGATCCAATTGCACTTGGTGCATTCAGTGCAATTCAAAAGGGAATTTTCGTTAGCTGTTCAGCTGGTAACTCTGGTCCTGGTTATACCACTTTGTCCAATGAGGCTCCCTGGATTCTCACCGTTGGTGCAAGCACCATTGACAGAAGAATAGTAGCAGCAGCAAAACTTGGCAACGGGCAAGTGTTCAACGGGGAATCTGTTTTCCAACCCAACAACTTCACCTCCACTTTACTCCCACTTGTGTATGCAGGTTCAATTGGAAATTCCTCGTCGAGCTTGTGTGCCCCTGGATCCTTAGAGAACGTAGACGTGAAGGGAAAGGTAGTGTTGTGCGAGGTTGGTGGATTCATTAGAAGAGTAAGCAAAGGACAAGAAGTTAAGAACGCTGGTGGTGTAGCCATGATCCTCATGAACTCACTAAAGGAAGACTTCAATCCATTTGCCGATGTTCACGTTCTTCCTGCTACACACGTGAGTTACCCTGCCGGGTTAGCCATCAAAAGTTACATAAACTCAACCTCAACACCAACAGCAACAATCTTGTTCGGAGGAACCGTTATTGGAAGTGTCTCTGCACCTGCAGTCACTTCCTTTTCCTCGAGGGGTCCAAGTTTTGCAAGCCCGGGAATTCTGAAGCCTGACATCATTGGTCCAGGACAGAACATTCTAGCTGCATGGCCCGTGTCTTTGGACAACAATGTGCCTTCATTCAACATCCTTTCAGGCACCTCAATGTCTTGTCCTCATCTCAGTGGCATTGCTGCTTTGCTTAAAAACTCTCATCCAGATTGGTCTCCTGCTGCCATAAAATCAGCAATCATGACCAGTGCTAATGCAGTAAACCTTGGAGGGAAGTCCATATTGGATGAAAGGCTTCTACCTGCTGATGTTTTTGCCACAGGAGCTGGACATGTTAACCCTTTGAAGGCCAATGATCCCGGCCTCGTTTATGATATTGAACCAAATGATTACATTCCTTATTTGTGTGGCTTGAACTACACTGATGAAGAAGTTGGACTGATTTTGAACCAAAATGTGGACTGCTCCCAGGTGAAAAGCATACCTCAGGCTCAACTCAATTATCCCTCGTTTTCAATTCGGTTGGGATCTACTTCACAATTCTACACCAGAACACTCACAAATGTTGGAGCCGCCAGTGTAACCTACAACGTAGAAATTGAAGCACCTTTGGGAGTAGGCATAAGCATAAGCCCTGCTGAGATAACATTCACAGAGGTGAAGCAGAAGGTTACATACTCTGTTGGATTTGTTCCGGAAGACAAAAAGAATAGAGGGAATCACCCGTTTTCTCAAGGGTCTATCAGGTGGGTATCTGGCAATGGCAAGTACTCTGTTAGCATCCCTATAGCTGTTGTTTTCCTATGA 2298 0.4569 MELALPLALIFMLISICQTSAHRNPEFVKAIKEHYFPTQEIDVPNSLLTYIVRVKKGDEGGDGDSLGSMDLHSWYHSLLPSSTRSDQKQNRITFLYRNVMDGFSVELTPEEADALQEKEEVVSVRPERTFSLHTTHTPSFLGLQQGLGGLWSNSDSGKGIIIGILDTGITPDHPSFSDEGMPFPPAKWKGLCEFSGRRTCNNKLIGARHFIKSSNSSLPLDHVGHGTHTASTATGRFVQGANVFGNAKGTAVGMAPDAHLAIYKVCDIFGCSESAILAGMDTAIEDGVDVLSLSIGGRSGPLFDDPIALGAFSAIQKGIFVSCSAGNSGPGYTTLSNEAPWILTVGASTIDRRIVAAAKLGNGQVFNGESVFQPNNFTSTLLPLVYAGSIGNSSSSLCAPGSLENVDVKGKVVLCEVGGFIRRVSKGQEVKNAGGVAMILMNSLKEDFNPFADVHVLPATHVSYPAGLAIKSYINSTSTPTATILFGGTVIGSVSAPAVTSFSSRGPSFASPGILKPDIIGPGQNILAAWPVSLDNNVPSFNILSGTSMSCPHLSGIAALLKNSHPDWSPAAIKSAIMTSANAVNLGGKSILDERLLPADVFATGAGHVNPLKANDPGLVYDIEPNDYIPYLCGLNYTDEEVGLILNQNVDCSQVKSIPQAQLNYPSFSIRLGSTSQFYTRTLTNVGAASVTYNVEIEAPLGVGISISPAEITFTEVKQKVTYSVGFVPEDKKNRGNHPFSQGSIRWVSGNGKYSVSIPIAVVFL* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1571 765 Gene3D Peptidase S8/S53 domain 159 628 IPR036852 GO:0004252|GO:0006508
Pvu2g1571 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 39 133 IPR037045 -
Pvu2g1571 765 ProSiteProfiles Serine proteases, subtilase domain profile. 129 615 - -
Pvu2g1571 765 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 32 764 - -
Pvu2g1571 765 PRINTS Subtilisin serine protease family (S8) signature 157 176 IPR015500 -
Pvu2g1571 765 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Pvu2g1571 765 PRINTS Subtilisin serine protease family (S8) signature 545 561 IPR015500 -
Pvu2g1571 765 SUPERFAMILY PA domain 382 482 IPR046450 -
Pvu2g1571 765 CDD PA_subtilisin_like 359 484 - -
Pvu2g1571 765 Pfam Fibronectin type-III domain 662 762 IPR041469 -
Pvu2g1571 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 764 IPR045051 -
Pvu2g1571 765 Gene3D - 632 764 - -
Pvu2g1571 765 CDD Peptidases_S8_3 132 582 IPR034197 -
Pvu2g1571 765 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 162 173 IPR023827 -
Pvu2g1571 765 Pfam Subtilase family 157 584 IPR000209 GO:0006508|GO:0008236
Pvu2g1571 765 Pfam PA domain 383 470 IPR003137 -
Pvu2g1571 765 Pfam Peptidase inhibitor I9 49 133 IPR010259 -
Pvu2g1571 765 SUPERFAMILY Subtilisin-like 132 619 IPR036852 GO:0004252|GO:0006508
Pvu2g1571 765 Gene3D - 351 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1571 Pvu-Chr2 29345231 29347786 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1571 90 764 Subtilisin-like Serine Gene Family AT1G04110 46.685 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1571 - - gmx:100799902 1225.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2207 3 42954231 42956480 Pvu2g1571 2 29345231 29347786 PCT