Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1567 ATGAGAAGACACCGTGCTATTCATCTCTCTCATGCTCTACTGTGCACCGTTTTTTGTTGTCTTGTGACGGCTTCTGCAGTGACTGAGAAGGAAATTTTGCTTGAATTCAAAGGAAACATAACGGACGATCCACGCGCCAGCTTGAGTTCTTGGGTTTCAAGTGGGAACCCGTGCAACGATTACAAAGGTGTTTCGTGTAACTCTGAAGGGTTTGTGGAGAGAATCGTACTGTGGAACACTAGCTTGGGAGGGGTGTTATCCTCGTCGCTTTCGGGGTTGAAGAGATTGAGGATATTGACGTTGTTCGGGAACCGTTTCTCGGGTGATATTCCAGAAGGGTATGGTGATCTTCACTCACTGTGGAAGATCAATTTGAGTTCCAATGCTTTATCTGGTTCGATCCCTGAGTTCATCGGTGATTTGCCTAGCATTCGGTTTCTAGATTTATCCAAGAATGGCTTCACTGGGCAGATACCTTCGGCTTTGTTTCGGTACTGCTACAAAACAAAGTTCGTTTCTCTTTCTCATAACAACCTTGCCGGTTCAATTCCTGCCTCCTTGGTGAACTGCTCTAACCTTGAAGGGTTTGATTTTTCCTTCAACAACCTTAGCGGGGTTGTCCCTTCGCGGCTTTGTGGCATTCCAAGGTTGTCATATGTGTCTCTGAGAAGCAATGCCTTGTCAGGGAGCGTGCAGGATCTCATTTCCTCATGCCAAAGTCTGGAACATTTGGATTTTGGAAGTAATAGATTCACTGATTTGGCTCCATTCAGTGTCCTTGGAATGCAAAATCTTACCTATTTCAATTTATCGTATAATGGGTTTGGAGGACATATTCCTGAGATCAGTACCTGTAGTGGGAGATTGCAAATCTTTGATGCTTCAGGGAATTTTTTGGATGGGGAGATTCCCTCCAGCATAACAAAATGCAAGAGCCTAAAGCTTTTGGCGTTGGAGTTGAATAGGCTGGAGGGGAATATCCCAGTGGATATTCAGGAACTGCGAGAACTAATAGTTATCAAATTGGGTAATAATTCCATTGGTGGAATGATCCCCAAGGGCTTTGGCAACGTTGAGCTTCTTGAATTGCTGGATTTGCACAATCTGAACCTCGTTGGCCAAATTCCTGATGATATAAGCAATTGCAAGTTTCTTCTTGAGCTGGACGTTTCTGGCAATAAATTAGAAGGTGAGATTCCTCAGACTCTTTACAACTTGACAAACCTGAAATCCCTTAACCTACAACATAACCAGCTTAATGGAAGCATCCCCCAAAGCCTAGGAAACCTATTAAGGATTCAATACCTAGATCTGTCACATAATTCACTTTCTGGCCCAATCCCTACTTCCCTTGGAAATTTAAATAACTTGACACATTTTGATCTCTCATTCAATAATCTGTCTGGTTTCATTCCTGAGATTGCAAACATACAGAGTTTTGGTGCATCTGCATTTTCCAATAATCCTTTTCTCTGTGGTCGTCCTTTGGACACCCCTTGCTTGGTAAACGGAGCTTCATCACCTTCATCTCCTGGGAAGGCTAAAGTTCTAAGCACCTCAGCAATTATTGCAATTGTCGCTGCAGCTGTAATTCTTGCTGGGGTTTGTTTGGTGACCATCATGAATATTATGGCACGTGACAGAGAAAAAGAAGAACCGATTATGATTGTTGAGAGCACACCACTTGGATCAACAGAATCAAATCTTATAATTGGAAAGCTGGTTCTCTTCAGCAAAAGTTTACCATCAAAATATGAAGATTGGGAGGCTGGTACCAAAACATTGCTTGATAAAGAGTCTTTGATAGGTGGTGGATCAATTGGTACAGTCTACCGAACTGATTTTGAAAGCGGGATCTCAATTGCAGTGAAGAAGCTCGAGACTATGGGAAGGATCAGAAACCAGGAGGAATTTGAGCATGAAATTGGGAGACTAGGCAACATTCAACACCCTAATTTAGTTGCTTTTCAAGGTTATTATTGGTCCTCTTCAATGCAGTTGATTCTATCAGAGTTTGTCCCAAATGGGAATCTCTATGATAATCTACATGGGTTGGGCTATGCTGGAACCAGCACTAGTAGAGGAAATAGGGAATTATATTGGTCCAGAAGGTTTCAAATTGCAGTGGGAACCGCAAGAGCCCTTGCTTATCTCCACCATGACTGCAGACCTCCAATTCTTCATCTCAACATTAAATCCTCTAACATACTCCTAGATGACAACTACGAAGCTAAGTTGTCTGATTATGGATTAGGAAAGTTACTTCCCATTTTGGATAATTATGGTCTGACCAATATCCACAATGCTGTGGGATATGTTGCACCAGAGTTGGCTCAAGGCCTGAGGCAGAGTGAGAAATGTGATGTTTACAGTTTTGGAGTCATTCTTTTGGAGCTGGTTACAGGGAGGAAGCCTGTGGAAAGTCCAACCACAAATGAGGTGGTGGTCTTGTGTGAATATGTAAGAGGTTTGTTAGAGACTAGCTCAGCTTCAGATTGCTTTGACAGAAATTTACTGGGCTTTACCGAGAACGAATTAATTCAGGTTATGAGATTGGGACTAATTTGTACTTCGGATGATCCTTTAAGGAGACCAAGCATGGCTGAGGTTGTCCAGGTCCTTGAATCCATTAGAAATGGATTGGATTCCCATTAA 2655 0.4252 MRRHRAIHLSHALLCTVFCCLVTASAVTEKEILLEFKGNITDDPRASLSSWVSSGNPCNDYKGVSCNSEGFVERIVLWNTSLGGVLSSSLSGLKRLRILTLFGNRFSGDIPEGYGDLHSLWKINLSSNALSGSIPEFIGDLPSIRFLDLSKNGFTGQIPSALFRYCYKTKFVSLSHNNLAGSIPASLVNCSNLEGFDFSFNNLSGVVPSRLCGIPRLSYVSLRSNALSGSVQDLISSCQSLEHLDFGSNRFTDLAPFSVLGMQNLTYFNLSYNGFGGHIPEISTCSGRLQIFDASGNFLDGEIPSSITKCKSLKLLALELNRLEGNIPVDIQELRELIVIKLGNNSIGGMIPKGFGNVELLELLDLHNLNLVGQIPDDISNCKFLLELDVSGNKLEGEIPQTLYNLTNLKSLNLQHNQLNGSIPQSLGNLLRIQYLDLSHNSLSGPIPTSLGNLNNLTHFDLSFNNLSGFIPEIANIQSFGASAFSNNPFLCGRPLDTPCLVNGASSPSSPGKAKVLSTSAIIAIVAAAVILAGVCLVTIMNIMARDREKEEPIMIVESTPLGSTESNLIIGKLVLFSKSLPSKYEDWEAGTKTLLDKESLIGGGSIGTVYRTDFESGISIAVKKLETMGRIRNQEEFEHEIGRLGNIQHPNLVAFQGYYWSSSMQLILSEFVPNGNLYDNLHGLGYAGTSTSRGNRELYWSRRFQIAVGTARALAYLHHDCRPPILHLNIKSSNILLDDNYEAKLSDYGLGKLLPILDNYGLTNIHNAVGYVAPELAQGLRQSEKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRGLLETSSASDCFDRNLLGFTENELIQVMRLGLICTSDDPLRRPSMAEVVQVLESIRNGLDSH* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1567 884 ProSiteProfiles Leucine-rich repeat profile. 240 261 IPR001611 GO:0005515
Pvu2g1567 884 Pfam Protein kinase domain 598 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1567 884 Gene3D Ribonuclease Inhibitor 176 506 IPR032675 -
Pvu2g1567 884 CDD STKc_IRAK 602 877 - -
Pvu2g1567 884 SUPERFAMILY L domain-like 164 492 - -
Pvu2g1567 884 SUPERFAMILY L domain-like 72 161 - -
Pvu2g1567 884 Gene3D Transferase(Phosphotransferase) domain 1 673 883 - -
Pvu2g1567 884 Pfam Leucine rich repeat 387 443 IPR001611 GO:0005515
Pvu2g1567 884 Pfam Leucine rich repeat 216 274 IPR001611 GO:0005515
Pvu2g1567 884 Pfam Leucine rich repeat 95 153 IPR001611 GO:0005515
Pvu2g1567 884 SUPERFAMILY Protein kinase-like (PK-like) 597 875 IPR011009 -
Pvu2g1567 884 Gene3D Ribonuclease Inhibitor 26 175 IPR032675 -
Pvu2g1567 884 PANTHER UNNAMED PRODUCT 22 881 - -
Pvu2g1567 884 ProSiteProfiles Leucine-rich repeat profile. 408 431 IPR001611 GO:0005515
Pvu2g1567 884 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Pvu2g1567 884 Gene3D Phosphorylase Kinase; domain 1 567 672 - -
Pvu2g1567 884 PANTHER - 22 881 - -
Pvu2g1567 884 ProSiteProfiles Protein kinase domain profile. 596 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1567 884 SMART LRR_typ_2 334 357 IPR003591 -
Pvu2g1567 884 SMART LRR_typ_2 454 476 IPR003591 -
Pvu2g1567 884 SMART LRR_typ_2 238 261 IPR003591 -
Pvu2g1567 884 SMART LRR_typ_2 406 430 IPR003591 -
Pvu2g1567 884 SMART LRR_typ_2 141 165 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1567 Pvu-Chr2 29314263 29318463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1567 25 883 Receptor kinase-like Gene Family AT1G62950 65.478 0.0 1101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Pvu2g1567 Pkinase 1.6e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1567 - - gmx:100800970 1549.26