Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1544 ATGTTCAGATCAGCTCAACCCGCTTCCAAACCTCCCCAGTCCACCATCAAATTCCTCTGCAGTTACGGTGGCAGAATCCTCCCTCGTTATCCTGACGGCAAGCTTCGCTACCTCGGAGGCCACACCCGTGTCCTCGCCGTCGACCGCTTTATTCCCTTCTCCGAGCTACTGCTGAAGCTGGAAGAGCTCTGCGGTGCCTCCGTGAGGCACCTTCGCTGCCAATTACCCTCCGAAGATCTCGATGCTCTCATCTCCATCACCTCCGACGAAGATCTCGCCAATCTCATCGAGGAATACGACCGCCTTTCGTCGCTCAAGATCAGAGCCTTCCTCTCGCCGCCGAGGTCTACGAACAACGCTTCCATTTCTCCGTCGAAATCGGCATCGTTGTCTTCCTCCTCGGCCTCATCATCGTCGTCGTCTTCGTCGTATTGCAGCCAAACCGGCAGAGCTGGGCGAAGTGACAGAACTTCGGCGCCGGTGGTCGACCGTTGCGTCCATCAGATGTCGCCAGCGCAGGCGTACCGAGTCGCAGTGGAGAAATCAAAACCCTCCGGGAGAAATATTCCTCTCCCGCGTTACGGGTACCACGGGAGCGGTGGCCAGGTTTACCTGGTCCACAACGGGAACCACTGGCAATAG 642 0.5763 MFRSAQPASKPPQSTIKFLCSYGGRILPRYPDGKLRYLGGHTRVLAVDRFIPFSELLLKLEELCGASVRHLRCQLPSEDLDALISITSDEDLANLIEEYDRLSSLKIRAFLSPPRSTNNASISPSKSASLSSSSASSSSSSSSYCSQTGRAGRSDRTSAPVVDRCVHQMSPAQAYRVAVEKSKPSGRNIPLPRYGYHGSGGQVYLVHNGNHWQ* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1544 213 Pfam PB1 domain 32 113 IPR000270 GO:0005515
Pvu2g1544 213 MobiDBLite consensus disorder prediction 113 154 - -
Pvu2g1544 213 SUPERFAMILY CAD & PB1 domains 32 122 - -
Pvu2g1544 213 Gene3D - 34 112 - -
Pvu2g1544 213 SMART PB1_new 30 112 IPR000270 GO:0005515
Pvu2g1544 213 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 8 212 - -
Pvu2g1544 213 PANTHER OS05G0427100 PROTEIN-RELATED 8 212 - -
Pvu2g1544 213 MobiDBLite consensus disorder prediction 113 160 - -
Pvu2g1544 213 CDD PB1_UP2 19 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1544 Pvu-Chr2 29029843 29032323 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1544 16 111 MAP Kinase Kinase Kinase AT5G57610 52.475 3.83e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1544 - - gmx:100810685 305.064