Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1541 ATGGAAGAAGCAATGAGGCGTCTCAACGGTGTGGCTCCGATTCTCGGATCCGACCCGAAAGAGTCAGCTGTCGGTGAAAACCCTAAACGGTCCACCGCAGTCAACAAGAGGACTTTAAGAGAAGACGGCAGCGGAGCCATGAGGTATCGTGGCGTGAGGCGCAGGCCGTGGGGACGTTACGCCGCCGAGATTAGAGACCCTCAGTCGAAGGAGCGACGATGGCTGGGAACCTTCGATACCGCGGAGGAAGCAGCCTGCGCCTACGACTGCGCCGCCAGAGCCATGCGCGGTCTCAAGGCACGCACTAACTTCGTGTACCCAACTTCTCCGCAAGCTTCTTCCGCCACCACCGAACACTTCTTTCATTCTTTTAATAATAACAACTTCATCAAACACTCTCCGTCACTACCCTTCACCAACCACCGTAGCCGCCACTCAACCGGTTCCGCCATGTGCTTTGACCACCCTAGCGCCGTTGACTTTTCCTATTCCAACCCGCGAAACCCTTCTTCCACACTCAATATGCTTCTCCTTCGCGACCTCATTAACTCTTCCTCAAACAACCCTTCTCTGCTTTCTTCTTCCACCCACAACTTCCACGACCAGTTCTACAACAAGGGTGCTTCTACTTTTTCGTCGTTACCAACTGTTTCTTCTTCTTCTTCGTCACCTCTTTTTCCTAGTTATTCGGTGAATTATCCTTTTGAAGGCTCTTCGTCTGTTAATGTGAACACCCTATGTGGAACTAATTTCACTGAAAAAGGTGATGATGATGATAGCGGGTCTGGATTTTTCTCTCGAGAGTCTTCGGATTCGGGATTGTTGGAAGAGATAGTTAACAAGTTCTTGCCCAAAACAAAGCCTAGTAAGTGCGAGAGTTTGCCAAAAATGGAGGTTTTTCGAAACCCTCAGGAGTCCCTTCTTCCTTCACTTATATCTGAATCAACACTTGTTTCCACCGTGCAATGCTCTGATGACACGAAGAAAGGGTTTCAGAAGAATGAGAGTTTCGGTGTTTCTTTCGATCATCAGGGTTTTCCCATGCAGAAATTTGACAGCTTTAATGGGTTTGATAGCGTGCAGGGTATGGCTCTGGGGAATGAACACACCATGGCGAATCATGCAGAGAATTGCATCGTTGAAGATGTTTTTCAGTACCAAGAGCTTCTTAATTCTTTTGCAATAAGGATGCAAAATGCTTAG 1203 0.4821 MEEAMRRLNGVAPILGSDPKESAVGENPKRSTAVNKRTLREDGSGAMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVYPTSPQASSATTEHFFHSFNNNNFIKHSPSLPFTNHRSRHSTGSAMCFDHPSAVDFSYSNPRNPSSTLNMLLLRDLINSSSNNPSLLSSSTHNFHDQFYNKGASTFSSLPTVSSSSSSPLFPSYSVNYPFEGSSSVNVNTLCGTNFTEKGDDDDSGSGFFSRESSDSGLLEEIVNKFLPKTKPSKCESLPKMEVFRNPQESLLPSLISESTLVSTVQCSDDTKKGFQKNESFGVSFDHQGFPMQKFDSFNGFDSVQGMALGNEHTMANHAENCIVEDVFQYQELLNSFAIRMQNA* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1541 400 MobiDBLite consensus disorder prediction 1 41 - -
Pvu2g1541 400 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Pvu2g1541 400 PRINTS Ethylene responsive element binding protein signature 71 87 IPR001471 GO:0003700|GO:0006355
Pvu2g1541 400 SMART rav1_2 48 111 IPR001471 GO:0003700|GO:0006355
Pvu2g1541 400 Gene3D AP2/ERF domain 47 106 IPR036955 GO:0003700|GO:0006355
Pvu2g1541 400 Pfam AP2 domain 48 97 IPR001471 GO:0003700|GO:0006355
Pvu2g1541 400 SUPERFAMILY DNA-binding domain 48 105 IPR016177 GO:0003677
Pvu2g1541 400 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 1 400 - -
Pvu2g1541 400 ProSiteProfiles AP2/ERF domain profile. 48 105 IPR001471 GO:0003700|GO:0006355
Pvu2g1541 400 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 400 - -
Pvu2g1541 400 CDD AP2 48 104 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1541 Pvu-Chr2 28972219 28973736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1541 47 367 AP2-EREBP Transcription Factor Family AT1G24590 36.697 3.61e-43 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu2g1541 AP2 3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1541 - - gmx:102669715 529.25