Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1531 ATGACTCGCAACTCAGAGAACAGTAGCACCAGCTTCGATAATGATTTTGAATGTGATGGTGCAGATGGTTCTAGAATCTTGCATTCCTGGAACCACCGGAACCTTGATTCTGGACATGAAGGTGGTGGTAGATCGGAGGAATTAGCATGTACTGTGCCGCAGAGCGAGGAAACTGTGAGGGCTATGGTGGAGAGAGAGAGGGAGCATTTCCCGAGGGTGGATTACTTGCAGAGGCTGAGGAGTGGGAAGTTGGACTTGGGTGTTAGGAGGGATGCACTTGATTGGATTTGGAAGGCTCATGCTTATTTTGGCCTTGGACCCTTGAGTTTTTGTTTAGCTGTGAACTACTTGGATCGCTTCCTATCGATTTTTGACTTACCGAAAGGTGTAAGTTGGACTGTGCAATTGTTAGCTGTAGCTTGCTTGTCAATTGCAGCTAAAATGGACGAGATTAGAGTGCCTCAATCTGTAGATTTACAGGTTGGGGAACCAAAGTTTGTGTTTGAAGCTAAAACCATTCAAAAAATGGAACTACTGGTATTAAGCAAGTTGAGATGGAAAATGTGTGCTTTAACTCCTTATTCCTTCATAGACTACTTCCTTAGCAAGATCACTTGTGAGAAGCACCCAACAAAATCATCCATTGCAATATCAGTGCAGCTCATCCTCAGTATAATCAGAGGTATCGATTTCTTGGAATTCCGGCCTTCTGAAATTGCTGCCGCGGTGGCAATTTCTGTTTTAGGAGAATCACAAGCGAAAGATATCGATAAGTCCATTGCTGATCTCTTTATAGTGGAGAAGGGTAGAGTTCTAAAGTGTGTTGAATTGATAAGAGATTTGTCCTTGAACAATGTTGCTGCTGGTGTAGGCAGCAAGGTGCCTCATGTGCCCCAAAGTCCTATGGGGGTGATGGATGCTGCTGGCTGCTTAAGCTATAAGAGTGATGAATTAACAGTTGGATCATGTCTAAATTCTTCACATGATAGTCGAAATCCAAACACTGAGAGTAGCAAAGGAGATGGACCTTCTAATGGAACCTCCAAGTGA 1050 0.4371 MTRNSENSSTSFDNDFECDGADGSRILHSWNHRNLDSGHEGGGRSEELACTVPQSEETVRAMVEREREHFPRVDYLQRLRSGKLDLGVRRDALDWIWKAHAYFGLGPLSFCLAVNYLDRFLSIFDLPKGVSWTVQLLAVACLSIAAKMDEIRVPQSVDLQVGEPKFVFEAKTIQKMELLVLSKLRWKMCALTPYSFIDYFLSKITCEKHPTKSSIAISVQLILSIIRGIDFLEFRPSEIAAAVAISVLGESQAKDIDKSIADLFIVEKGRVLKCVELIRDLSLNNVAAGVGSKVPHVPQSPMGVMDAAGCLSYKSDELTVGSCLNSSHDSRNPNTESSKGDGPSNGTSK* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1531 349 MobiDBLite consensus disorder prediction 324 349 - -
Pvu2g1531 349 SMART cyclin_7 94 182 IPR013763 -
Pvu2g1531 349 SUPERFAMILY Cyclin-like 50 188 IPR036915 -
Pvu2g1531 349 SMART Cyclin_C_2 191 313 IPR004367 -
Pvu2g1531 349 PANTHER CYCLIN-D4-1-LIKE 54 335 - -
Pvu2g1531 349 Gene3D - 61 277 - -
Pvu2g1531 349 PANTHER CYCLINS 54 335 IPR039361 -
Pvu2g1531 349 Pfam Cyclin, C-terminal domain 192 285 IPR004367 -
Pvu2g1531 349 Gene3D - 72 189 - -
Pvu2g1531 349 CDD CYCLIN 89 181 IPR013763 -
Pvu2g1531 349 Pfam Cyclin, N-terminal domain 59 189 IPR006671 -
Pvu2g1531 349 ProSitePatterns Cyclins signature. 89 120 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1531 Pvu-Chr2 28774731 28777298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1531 54 259 Core Cell Cycle Gene Families AT5G65420 60.577 7.76e-88 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1531 K18810 - gmx:100794010 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1531 2 28774731 28777298 Pvu3g2980 3 51528539 51531066 PCT