Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1523 ATGGATCCGTTCAAAGGATCCGAACCCGAAAACCCTATCGCCACATGCCTTTCCATGCTCTCCCTCCGCCGCTTCTCCGCCTGCCGCGACTTCGCCCACCGCCTCCCTCCCACCGACACAGTCGCACGAGTCCTCGCCGTCGCCGAGGTCCTCTCCGCCGCTGACTTCTACTCTGTTCTCCAGCTCCACCCATCCGACGGCGACAACCGCGACCTGGTGCGGCGGCAGTACACGAAGATGGCGCTCCTCCTGGACCCGACGAGCCCTGACAAGTTCCCCTTTTCCGACGAGGCCCTCGCACGTGTGCAGGAGGCCTGGCACATACTCTCCCGCCCCGAGCGCCGCGCCCTTTACCACCGCGAGCGCCCAGTCCCCGTAGCGGCGACGTTTTGGAGCGCATGCCCCTACTGCTGGAACCTGTTCGAGTACGAGAAGAAGTACGAGGATTGCGCGCTGTTGTGCCAGATTTGCAGTAAGGCTTTCCAGGGCGTGGCGGTGGTACCGCCGAAAATGGTGGGCGACGCGGTGGTGGAGGGGGAGGAGCTCCGACAGTACTACTCGTGCGAGGCGAGTGTGCCCTTGAGGTATTACGAGGTCAAGGAGGAGATTAAGGGTAGCAACGTTTTTGGTGAACAAAATGCTGCATCGCTTGTGTACCTTTCTGATGATGATAATGAAGGGTTTGCCATGAGAAATGAAGGGTTGCGTGGGAATGGCGAGAAGCGGCGAATGAGGGTAAAGACTGTGGCGAAGAAGGTTAGTGGGAACAGGGCGAGGAGACCTCTTGATAGTGACTCGGATTTGGATTTTGATTTGGGTGAGGGAGATGATGAATTGGAGTTCACTGAAGGAGATGATGATGTCTTTGTTGGTGTGCGATCTCGAAAGTGA 891 0.5814 MDPFKGSEPENPIATCLSMLSLRRFSACRDFAHRLPPTDTVARVLAVAEVLSAADFYSVLQLHPSDGDNRDLVRRQYTKMALLLDPTSPDKFPFSDEALARVQEAWHILSRPERRALYHRERPVPVAATFWSACPYCWNLFEYEKKYEDCALLCQICSKAFQGVAVVPPKMVGDAVVEGEELRQYYSCEASVPLRYYEVKEEIKGSNVFGEQNAASLVYLSDDDNEGFAMRNEGLRGNGEKRRMRVKTVAKKVSGNRARRPLDSDSDLDFDLGEGDDELEFTEGDDDVFVGVRSRK* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1523 296 CDD DnaJ 55 111 IPR001623 -
Pvu2g1523 296 Gene3D DnaJ domain 50 121 IPR036869 -
Pvu2g1523 296 Pfam DnaJ domain 55 118 IPR001623 -
Pvu2g1523 296 SMART dnaj_3 54 114 IPR001623 -
Pvu2g1523 296 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 293 - -
Pvu2g1523 296 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 293 - -
Pvu2g1523 296 SUPERFAMILY Chaperone J-domain 47 122 IPR036869 -
Pvu2g1523 296 MobiDBLite consensus disorder prediction 254 281 - -
Pvu2g1523 296 ProSiteProfiles dnaJ domain profile. 55 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1523 Pvu-Chr2 28622289 28623505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1523 7 196 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 28.070 1.61e-23 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1523 - - gsj:114406356 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1523 2 28622289 28623505 Pvu3g2978 3 51516170 51517240 PCT