Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1517 ATGGCTCTTCCTGGTTCCCTGCAGTTGTCCCATGGATTGGGACTTTGCAGGAACCTGGGCTACAGTAAAGATTCGAGGGCAAAGGAGCATGGCAAGTTACACTTATTTATGGCAGGTCCTTCATATCCTATTTCGTTCATGAGACAGGAGTGCAGGGGTTTTCAACACCTTCGAGATATAAACAAGCCAACACATACATTATCGTGCAAAGCTCGATCTTTTAAATGTCATTGTTTTTCTGGGCAACCAAATGATCTTCCTGCTGTTAAGGTGGCTGCTACCGTGTTGGCTAGGTCTAGTAATTTGTTACAAAATAGTCCTATCATTGTAAAGTTGATTCCTGCAATTGGCGTTGTCATTTTTGCAATATGGGGTGTTGGTCCATTATTGTTCCAGACAAGGAAAATACTTTTTAAGAAGAGTGATAATAGTTGGAAGAAAAGTACCACTCACTATATAGTAACTTCTTACCTTCGGCCATTACTGTTATGGACTGGAGCAATACTTATTTGCAGAGCATTAGAGCCATTAATTCTACCTTCAGAACCTGGCCAGCTTGTTAAGGAACGGCTTCTGAATTTTGTGAGATCATTGTCAACAGTTCTGGCCTTCGCCTATTGTTTATCAAGTGTAATTCAACAATCACAGAAATTCTTTGCAGAGTGTACTACTGATGCAAGTGAGACGAGAAATATGGGATTCCAATTTGCTGGCAAAGCTGTTTATTCTGCAGTGTGGATAGCTGCCTTTTCATTGTTCATGGAATTGTTAGGCTTCTCTACCCAGAAATGGGTTACTGCAGGAGGTTTTGGGACAGTTTTGCTGACTCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCAAGTGTGATGATTCACGCAACTCGGCCTTTTGTGGTTAATGAATGGATTCAAACAAAGATTGAAGGATATGAGGTTTCTGGTACTGTTGAGCATGTTGGCTGGTGGTCACCAACAATTATTAGAGGTGAAGATCGTGAAGCTGTTCACATTCCAAACCACAAATTTACAGTGAATGTTGTGCGGAACCTTAGTCAAAAAACACATTGGCGAATCAAAACCCATCTAGCCATTACTCATTTGGATGTAAATAAGATTAATAACATTGTTGCTGACATGCGGAAGGTATTGGCCAAAAATCCTCAAGTTGAGCAACAGAGGTTGCACAGGAGAGTGTTTTTGGACAACATAAATCCTGAAAGTCAGGCTCTTTTGATTCTGGTGTCTTGTTTTGTCAAGACCTCACATTTTGAAGAATATCTGTGTGTTAAGGAAGCAATACTGTTGGATCTTCTTAGAGTTATAGGCCATCACCGAGCCAGGCTTGCCACACCGGTCCGTACCCTGCAGAAAGTGTACAGTGATGCTGACTTGGAGAATATACCGTTTGCAGATTCCACATTTGGTGGTGGTGGTGCTGGCACAGTACCTAACCGTCCATTACTAGTAATTGAACCGTCTTACAAAATCAATGCAGATGATAAGATGAAAAATCGATCAGCACGACCAGTTGTTGATCAAGATAACAAGACATCTAACTCTGATGCAAATGGAAACTCTAAGACAGTTGTGACATCTAATTCTGACACAAATGTAAAGACAGTTGTGACACCCAAACCTGATCCAGAAGTGGGTGAAAACAAGCCACTGAAATCAGATTCAAATAAGGAAAACGTGGAGGTTCCAGGATCTTCTTCTAAATCTAAAGTATCTGGTTTGGTAGTAGAAAGTCTATCCCAGAAGGACATAGATGCCAAGCAATCCAAGGGTCAGACCACTAAAAACATAAAGCCAAATATTGAGTCTGACAATGTAGTGTCCTCCTCATCTAACAATGCTGACAAAACTGGTGGACTTAATACGAATATACCATCAAAACCACAAGGGGAAAAGAAACCTGCATCCAGGAATGTTCTTGAAGAGAATATAGTACTAGGTGTTGCATTGGAGGGATCAAAGAGGACACTTCCCATTGATGAGGAGATTGAGGATGTGACATCTCGAGAGGCAAAGGAAATGGCTGCATTCCAGGGTGGAAATGGATCTTCCAAGGCTGTAGATGGAAAGGACTAG 2094 0.4131 MALPGSLQLSHGLGLCRNLGYSKDSRAKEHGKLHLFMAGPSYPISFMRQECRGFQHLRDINKPTHTLSCKARSFKCHCFSGQPNDLPAVKVAATVLARSSNLLQNSPIIVKLIPAIGVVIFAIWGVGPLLFQTRKILFKKSDNSWKKSTTHYIVTSYLRPLLLWTGAILICRALEPLILPSEPGQLVKERLLNFVRSLSTVLAFAYCLSSVIQQSQKFFAECTTDASETRNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQKWVTAGGFGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAITHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNINPESQALLILVSCFVKTSHFEEYLCVKEAILLDLLRVIGHHRARLATPVRTLQKVYSDADLENIPFADSTFGGGGAGTVPNRPLLVIEPSYKINADDKMKNRSARPVVDQDNKTSNSDANGNSKTVVTSNSDTNVKTVVTPKPDPEVGENKPLKSDSNKENVEVPGSSSKSKVSGLVVESLSQKDIDAKQSKGQTTKNIKPNIESDNVVSSSSNNADKTGGLNTNIPSKPQGEKKPASRNVLEENIVLGVALEGSKRTLPIDEEIEDVTSREAKEMAAFQGGNGSSKAVDGKD* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1517 697 MobiDBLite consensus disorder prediction 500 645 - -
Pvu2g1517 697 MobiDBLite consensus disorder prediction 564 582 - -
Pvu2g1517 697 Pfam Mechanosensitive ion channel 239 445 IPR006685 GO:0016020|GO:0055085
Pvu2g1517 697 Gene3D - 298 353 IPR023408 -
Pvu2g1517 697 Gene3D - 192 296 - -
Pvu2g1517 697 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 697 IPR045042 -
Pvu2g1517 697 SUPERFAMILY Sm-like ribonucleoproteins 282 352 IPR010920 -
Pvu2g1517 697 MobiDBLite consensus disorder prediction 591 635 - -
Pvu2g1517 697 MobiDBLite consensus disorder prediction 512 542 - -
Pvu2g1517 697 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 1 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1517 Pvu-Chr2 28466488 28474623 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1517 9 688 Mechanosensitive Ion Channel Family AT5G10490 57.681 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1517 K22047 - gmx:100796304 1191.41