Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1511 ATGGATGCAATCCAAACAGAGAAAGTCTATGTTGCTGTTGGTAATGATGCACAGGATGGATTTAAGACTTTGAATTGGGCTCTCAAGAAATGGAATTCTCATCCAATTTCCGTTGTTATTCTCCATGTCACACACAGCACTCCCATGGATTGTGTCTATACACCATTTGGGAAACTTCCAGCAAGATCTGTGAGTGAGGAGAAACTACAAATTCTCAGGAAAGACGAGCAAGAGAAAATCAACAAGCTGCTTTCCAAATATGTTGCTTTCTGTGGCAAGGTGCCAGCAGATATTCTTGAAGTTGAGAAATCGGATGAGCCATTGCAAAAGCGAGTCATAGACTTGATCTTTGGTCTAGGAATAACCAAATTGGTCATGGGATTTTCATTCATGAAGCCCTCCATGAAATCTAAAGGTGCTATAAGTGGATTGTTCTATGTTCATCAGCACAAACCTTCTTTCTGTGAATTGTTCATTATTTGTGGGGGGAAGCAAATTTTCCTGAGTGGAAAAAATGATGAGAAAATCATGGAGGATGATCAAGGAGTCATGGTTGCAAGAATAAGAGATAAGATAACCTTCAAAGATTGGTTAGATAAATGGTTCCATGACAAAACCAACGATTCTCTAGATAAAAGTGAATCACTTTCCTCAAGCAATTTGGAGTCCCCAGTGAACAGAAACCGGTGGGAATTTTACCTGCAGGAAATTGAAAATTATTATCAAGAATTGTTATCTTCAAAGTTGGAGGAAGGAAACTGCGGGCTAGATAATGACGAGTCACAGATTGGTCCAAATGAGCCACATGTTACTGAACACAACAATTATAATAAGAGTGGTGCAGAGAAAATTGAGATTCTGAAAAGTAAGCTGAATGAAGCTCAGAAGACGATCCTATTGAAGAGGAAAGAGGCGAAAGATAGTAAAGAGAGGCACGCAAAAGCTGAATGGGCAATTTGTTTATGCAACAGTCGAGCTGAAGAAGTGGAAGGTCGAATTCGAGAAGAGGTGAGTGCTAAGGAGGAGCTACGGAAGGAATGGGAAGCGGAGAGAGAGCAGACGGAGGAGATGAGAATGGAGGTGGAAGAGAGGAGGAGGAGGCTCAGTTCCCTGACGGAGGTGCAATCGGAGCTCTCCAACAGGCTTCAAATATGGACGCTAAGCAAGACGCGAGCGGAGACGCAGCTCGAGAGGGCGGTAGGGGAGAGAAGGGAGATGGTGAGGGAGATCGAGGAGCTCAGGCGCCAGAGAGACGTGCTCAACCGAAGGATCGAGTTCTGCAAGCAGAAGGACGCCATTGGAATGGCCGCTAGGCTCGCCGACACGTGCTGCACCTTCCGCGAGTACACGGCGGAGGAGGTCCGCTTGGCCACCGACAACTTCTCCGAGAGGCTGAGGTTGAAGTCCGGCGGAGATTGGAGCAATGTGTACCGAGGACGCTTCAACCACTCCACCGTTGCCATCAAGATGCTCCCTTCTTTCTCCCTCCAACATTTCCAATCCAAGGTGAGGGTTCTTGGTGATATTAGGCATCCTCATTTGATTGCTATGGTGGGGTTTTGCTCCGAGCCCAAGTGCATAGTTTTGGAATACATGCGCAACGGAAGCTTAACAGACATGCTGTTTTCTAGGAGAAAAAACCGCGGTCTAAGATGGCACGACCGAATACGAATTGCCTTAGAAGTTTGTTCGGGCCTGGGCTTTCTCAATGCAGCGGAGCCAAGGCCTGTTATTCACTGCCATTTGACCCCACCCAAAGTACTCCTAGACCGCAATTTGGTTGCAAAGATCACGGGCATTGGGCTCCATGATTGCCGTGACGAACAGTGTAACGTTGAGTCAGATTTGCGGGCTATGGGGGTTTTGTTAATGCATCTTTTGACAGGAAGAAATTGGGCCGGGCTCGTTGAGGAGGTGATGACAGTGGATATGGGTAGAGAGGCTTTGTGTAGCGTTCTAGATGAGATGGCTGGGCAATGGCCACCAGATCTAGCAAAAGAACTTGCAGGCCTGGCTTTTAGGTGCATGTCCACCAAAAGCAAACCCAACTCAGAACTGAGCATTGCAAAAGTCTTGGAGGAACTGAATGAGATAAGGAGAAAGGGAGATGAAATAGTTGGAAGGGAAGGACGAAAGGCAATTATTGGTGGGTGTATAGATAGAGAGGGATCCAGTGATGTGCCTAGTGTTTTTCTTTGCCCCATTCTTCAGGAGGTAATGAAAAGCCCACACTTGGCAGCAGATGGGTTTTCTTATGAGCTTGAAGCAATAGATCACTGGCTGCAATCAGGGCGTGATACCTCACCAATGACAAATTTGAGGCTGAAACACACATTCCTCACCCCGAATCACACTCTCCGTTCCCTCATTGAAGATTGGCAGACCAACAAATCACCTAAACTTACACACTAA 2412 0.4635 MDAIQTEKVYVAVGNDAQDGFKTLNWALKKWNSHPISVVILHVTHSTPMDCVYTPFGKLPARSVSEEKLQILRKDEQEKINKLLSKYVAFCGKVPADILEVEKSDEPLQKRVIDLIFGLGITKLVMGFSFMKPSMKSKGAISGLFYVHQHKPSFCELFIICGGKQIFLSGKNDEKIMEDDQGVMVARIRDKITFKDWLDKWFHDKTNDSLDKSESLSSSNLESPVNRNRWEFYLQEIENYYQELLSSKLEEGNCGLDNDESQIGPNEPHVTEHNNYNKSGAEKIEILKSKLNEAQKTILLKRKEAKDSKERHAKAEWAICLCNSRAEEVEGRIREEVSAKEELRKEWEAEREQTEEMRMEVEERRRRLSSLTEVQSELSNRLQIWTLSKTRAETQLERAVGERREMVREIEELRRQRDVLNRRIEFCKQKDAIGMAARLADTCCTFREYTAEEVRLATDNFSERLRLKSGGDWSNVYRGRFNHSTVAIKMLPSFSLQHFQSKVRVLGDIRHPHLIAMVGFCSEPKCIVLEYMRNGSLTDMLFSRRKNRGLRWHDRIRIALEVCSGLGFLNAAEPRPVIHCHLTPPKVLLDRNLVAKITGIGLHDCRDEQCNVESDLRAMGVLLMHLLTGRNWAGLVEEVMTVDMGREALCSVLDEMAGQWPPDLAKELAGLAFRCMSTKSKPNSELSIAKVLEELNEIRRKGDEIVGREGRKAIIGGCIDREGSSDVPSVFLCPILQEVMKSPHLAADGFSYELEAIDHWLQSGRDTSPMTNLRLKHTFLTPNHTLRSLIEDWQTNKSPKLTH* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1511 803 Coils Coil 389 430 - -
Pvu2g1511 803 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 725 801 IPR013083 -
Pvu2g1511 803 Coils Coil 326 371 - -
Pvu2g1511 803 Coils Coil 277 311 - -
Pvu2g1511 803 Pfam U-box domain 727 797 IPR003613 GO:0004842|GO:0016567
Pvu2g1511 803 ProSiteProfiles Protein kinase domain profile. 462 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1511 803 Gene3D Phosphorylase Kinase; domain 1 435 531 - -
Pvu2g1511 803 CDD RING-Ubox_WDSUB1_like 731 772 - -
Pvu2g1511 803 Pfam Protein tyrosine and serine/threonine kinase 471 606 IPR001245 GO:0004672|GO:0006468
Pvu2g1511 803 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 50-RELATED 5 796 - -
Pvu2g1511 803 SUPERFAMILY RING/U-box 724 797 - -
Pvu2g1511 803 ProSiteProfiles U-box domain profile. 726 800 IPR003613 GO:0004842|GO:0016567
Pvu2g1511 803 Coils Coil 66 86 - -
Pvu2g1511 803 SMART Ubox_2 730 793 IPR003613 GO:0004842|GO:0016567
Pvu2g1511 803 Gene3D Transferase(Phosphotransferase) domain 1 532 703 - -
Pvu2g1511 803 PANTHER OS02G0152300 PROTEIN 5 796 - -
Pvu2g1511 803 SUPERFAMILY Protein kinase-like (PK-like) 446 678 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1511 Pvu-Chr2 28392244 28396719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1511 7 802 U-box Gene Family AT5G65500 49.629 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pvu2g1511 PK_Tyr_Ser-Thr 3.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1511 - - gmx:100786771 1357.04