Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1509 ATGGCTCGTGCGACTAACTGGCTATCGTTCTCGCTCTCCCCCATGGAAATGCTCCGAACCTCCGAGCCTCAGTATGTGCAATACGACGCCGCTTCTGCGAATAACTCGCATCACTATTTTCTCGATAACTTGTACGCCAACGGGTGGGGAAACGGGAACCTCAAGCCTCAGGTGCTGATGGAGCAGAATCTGAACCAGAGCGAGGTTAGTTATGTCGAATCGTCGCACTCGCAGAGCGTCAGCCACGCGCCACCGCCCAAGCTCGAGGACTTTCTTGGCGACTCCTCCGCTGTGATGCGTTATTCCGACAGCCAGACGGAGACGCAGGACTCGTCGCTGACTCACATGTATGACCACCACAGCTCTGCGTTCTTCGGCGACCAGCAGGATCTCAAGGCCATTGCTGGATTCCAGGCTTTTTCGACCAACTCTGGTTCCGAGGTTGATGATTCCGCGTCCATCGGGAAAGCGCAGCCCAGCGAGTTCGGGACTCACTCTATTGAGTCCTCTGGGAACGAGTTCGCCACTTTTTCCGGGGGCGCCACCGGCAATCTCTCGCTCGCAGTCGCTCAGAGCTCCGAGAAGGCCGTTTCTGCGGCAGATTCCGGAAGCTCCAAGAAGGTCGTGGATACCTTCGGCCAGCGAACTTCTATTTACAGAGGTGTCACCAGGCACCGATGGACAGGTAGATATGAAGCGCATCTATGGGACAACAGTTGCAGAAGGGAGGGTCAAGCGAGGAAAGGGCGTCAAGTTTATTTGGGTGGATATGATAAGGAAGAAAAGGCCGCTAGAGCTTATGATTTGGCAGCTCTAAAGTACTGGGGGCCCACCGCTACCACCAACTTCCCTGTATCCAATTATTCAAAGGAATTGGAGGAGATGAAGCATGTTACGAAGCAAGAATTTATTGCATCCCTGCGAAGGAAAAGTAGTGGGTTTTCCAGGGGAGCTTCTATATACAGAGGTGTCACAAGGCATCATCAACAGGGTAGATGGCAAGCAAGAATTGGCCGGGTAGCTGGAAACAAAGATCTGTACCTGGGAACATTCGCAACTGAAGAGGAGGCAGCGGAGGCATACGATATTGCAGCAATAAAGTTCAGAGGTGCAAATGCAGTAACCAATTTTGAGATGAATAGATATGATGTGGACGCTATAATGAAGAGTTCTCTTCCAGTGGGTGGGGCAGCAAAACGCTTGAAGCTTTCTCTGGAATCAGAGCAGAAAGTTGCTGTGAGCAGCAATCAGCAGAATCCACAGTGTGGAAACGGGAGTGGCAGCATCAATTTCTCGGCCATTCACCAGCCGATTGCTTCAATCCCTTGTGGAATTCCGTTTGATTCTTCAACAGCATATTACCATCACAACCTTTTCCAACATTTTCATCCTTCCAACGCTGGCACAGCAGTGTCCACTGTCACTTCTGCTAATGCAACTGGGCTTAATGCACTGCCTCCTCCAGCAACAACAGCAGCTGAGTTCTTTATTTGGCCTCACCAGTCTTATTGA 1512 0.5126 MARATNWLSFSLSPMEMLRTSEPQYVQYDAASANNSHHYFLDNLYANGWGNGNLKPQVLMEQNLNQSEVSYVESSHSQSVSHAPPPKLEDFLGDSSAVMRYSDSQTETQDSSLTHMYDHHSSAFFGDQQDLKAIAGFQAFSTNSGSEVDDSASIGKAQPSEFGTHSIESSGNEFATFSGGATGNLSLAVAQSSEKAVSAADSGSSKKVVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKEEKAARAYDLAALKYWGPTATTNFPVSNYSKELEEMKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGANAVTNFEMNRYDVDAIMKSSLPVGGAAKRLKLSLESEQKVAVSSNQQNPQCGNGSGSINFSAIHQPIASIPCGIPFDSSTAYYHHNLFQHFHPSNAGTAVSTVTSANATGLNALPPPATTAAEFFIWPHQSY* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1509 503 ProSiteProfiles AP2/ERF domain profile. 218 284 IPR001471 GO:0003700|GO:0006355
Pvu2g1509 503 SMART rav1_2 218 290 IPR001471 GO:0003700|GO:0006355
Pvu2g1509 503 SMART rav1_2 320 384 IPR001471 GO:0003700|GO:0006355
Pvu2g1509 503 MobiDBLite consensus disorder prediction 148 169 - -
Pvu2g1509 503 CDD AP2 217 286 IPR001471 GO:0003700|GO:0006355
Pvu2g1509 503 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 5 500 - -
Pvu2g1509 503 Pfam AP2 domain 320 370 IPR001471 GO:0003700|GO:0006355
Pvu2g1509 503 Pfam AP2 domain 218 276 IPR001471 GO:0003700|GO:0006355
Pvu2g1509 503 PRINTS Ethylene responsive element binding protein signature 219 230 IPR001471 GO:0003700|GO:0006355
Pvu2g1509 503 PRINTS Ethylene responsive element binding protein signature 360 380 IPR001471 GO:0003700|GO:0006355
Pvu2g1509 503 Gene3D AP2/ERF domain 320 380 IPR036955 GO:0003700|GO:0006355
Pvu2g1509 503 Gene3D AP2/ERF domain 218 286 IPR036955 GO:0003700|GO:0006355
Pvu2g1509 503 SUPERFAMILY DNA-binding domain 217 286 IPR016177 GO:0003677
Pvu2g1509 503 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6 5 500 - -
Pvu2g1509 503 CDD AP2 319 378 IPR001471 GO:0003700|GO:0006355
Pvu2g1509 503 ProSiteProfiles AP2/ERF domain profile. 320 378 IPR001471 GO:0003700|GO:0006355
Pvu2g1509 503 SUPERFAMILY DNA-binding domain 319 379 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1509 Pvu-Chr2 28359488 28364314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1509 86 503 AP2-EREBP Transcription Factor Family AT5G10510 59.562 1.02e-175 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pvu2g1509 AP2 9.5e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1509 2 28359488 28364314 Pvu3g2970 3 51447092 51451369 PCT