Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1508 ATGGCATTCTCACGTAATCATGCGAAAGAGTTTATGAGCGACGGCGAGGGATCACCGAGGGCGATTCTGGAAACCCCTGTTTCGGAGACAGAGTCTGAGACGGAGTCATCGTTGGATAGCGGAAAAGAGGGTTACACGCTGCCATGGAAGTCTATGGTCGACGTTTTCAAGTTCAAGTCTGTGCGAAAATTAACGTCCATTCCTCTGCTTTCGGTGAGCCATGATATCTCTCGGAAGGGTTTGACCAAAAAACTTGCTCGTATTCGAAGTGCCGAAGAGGGTATTGATATTGGCGCTATTCCCGCGAAACCCTCTTGGAGAAACTTTGATTATGAAGAGTTAGCAACTGCTACTAACAATTTTAGTTCTGAGAACTTGGTTGGGAAAGGTGGTCATGCTGAAGTGTACAAAGGAAACTTACCTGATGGTCAAGTTATAGCTGTAAAGAGGCTAATGAAGAATGAAAAGGATGCTGCAGATAGAGCTGGTGATTTTTTGACAGAGCTTGGGATTATTGCACACATAAACCACACAAATGCAACACACCTTGTTGGGTTTGGTGTTGATGGAGGCCTCTTCTTTGTCCTACAATTAGCTCCGCATGGAAGTCTTAGTTCTTTGCTTTTTGATTCTGAAGGCCTGGACTGGGGAAAACGATTCAAGATAGCTATTGGAGTGGCTGATGGATTGCATTATCTCCATAAAGAGTGCCCAAGGCGAATCATTCATAGGGACATCAAGGCCTCCAACATATTACTAAACGAAAATTATGAAGCTGAGATTTCAGATTTTGGACTGGCCAAGTGGCTTCCAAATAAGTGGGCCAACCATGTTGTCTTCCCAATAGAAGGCACATTTGGCTATTTAGCTCCGGAGTATTTTATGCATGGAATTGTGGACGAGAGAACTGATGTATTTGCATTTGGAGTTTTGCTGTTGGAGCTCATAACAGGCCGTCGTGCTGTTGATTCAGATAGCAGGCAAAGTCTTGTCACCTGGGCCAAGCCACTGCTGGACACAAACAATGTAAAAGACATTGCAGACCCCAGATTAGGAGAGGAATATGATCATCAAGAAATGCTGCGAGTCATGGTGACAGCTTCCATGTGTGTCCACCATGCATCCTCCAAACGGCCATTCATGAATAAGGTTGTGCAGATGCTAAACGGGGAAGAGTCAATTATAGACCTTAAGCAAAATTCAATGGCACCAAAATCTCAATTGTTAGAGGCATGTGACCTAGAAGATTATACTTGCTCAAGTTACCTAAAGGACATGAGTCGCCACATGCAACTGATCATGGAGTGA 1308 0.4427 MAFSRNHAKEFMSDGEGSPRAILETPVSETESETESSLDSGKEGYTLPWKSMVDVFKFKSVRKLTSIPLLSVSHDISRKGLTKKLARIRSAEEGIDIGAIPAKPSWRNFDYEELATATNNFSSENLVGKGGHAEVYKGNLPDGQVIAVKRLMKNEKDAADRAGDFLTELGIIAHINHTNATHLVGFGVDGGLFFVLQLAPHGSLSSLLFDSEGLDWGKRFKIAIGVADGLHYLHKECPRRIIHRDIKASNILLNENYEAEISDFGLAKWLPNKWANHVVFPIEGTFGYLAPEYFMHGIVDERTDVFAFGVLLLELITGRRAVDSDSRQSLVTWAKPLLDTNNVKDIADPRLGEEYDHQEMLRVMVTASMCVHHASSKRPFMNKVVQMLNGEESIIDLKQNSMAPKSQLLEACDLEDYTCSSYLKDMSRHMQLIME* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1508 435 Pfam Protein tyrosine and serine/threonine kinase 124 388 IPR001245 GO:0004672|GO:0006468
Pvu2g1508 435 Gene3D Transferase(Phosphotransferase) domain 1 200 408 - -
Pvu2g1508 435 ProSiteProfiles Protein kinase domain profile. 121 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1508 435 Gene3D Phosphorylase Kinase; domain 1 99 196 - -
Pvu2g1508 435 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 8 435 - -
Pvu2g1508 435 PANTHER OS08G0249100 PROTEIN 8 435 - -
Pvu2g1508 435 MobiDBLite consensus disorder prediction 1 41 - -
Pvu2g1508 435 SMART serkin_6 121 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1508 435 ProSitePatterns Protein kinases ATP-binding region signature. 127 149 IPR017441 GO:0005524
Pvu2g1508 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Pvu2g1508 435 SUPERFAMILY Protein kinase-like (PK-like) 105 395 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1508 Pvu-Chr2 28352172 28357010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1508 109 384 Trihelix Transcription Factor Family AT1G68690 46.690 1.16e-72 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pvu2g1508 PK_Tyr_Ser-Thr 3.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1508 - - pvu:PHAVU_002G146300g 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1508 2 28352172 28357010 Pvu3g2968 3 51439878 51442962 PCT