Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1502 CAACTAATTTCCCAATTCCAGCAGCTATTTATCGAGCAAAATCTTGAAATTTGTAATGCTAGTGATGGAACATATTTGGTGTGGACTGAGCTGCACAATGCAAGAACACTTATAATTCTTGACAATGTTGATCAAGATATACGTAGATGTGTAGGTGAAGGTAGCATAATCATCATAATTTCAAGGGATGAACATATATTAAAGACACATGGAGTGGATGATGTGTATCAAGTTCAGTTGTTGAGTTGGGAAATCGTTGTACACTTAAGTGCATTGGGTAGGCTAAGATATAATAAAGATAGAAATGTTATGAATGTTTTACATATAAGTTTTGATCAGTTGGAAGAAGAAAAAAAAATATTTCTTGATATTGCATGTTTCCTTCATAATCACTTATATTATAATGAAATTTTAAGCATCCATGGATTTGATTATGAAAATGGCATACCATCTCTGATTGAGAAATCTCTCATAACATGTGAACATGTGGATATTTATATACACAGGTTGTTGATAGGTTTAGGACAGAGTATTATTAGAGAAAAATCACCTAAAGAGCCTCTAAAGTGGAGTAGGTCGTGGGATTGCAAAGATTTCGAGAAAGTTATGTTAGACAATGAGGCATCTGAAAATCTTGAAGTCATATATATTGAATGTGATTTGCTTGTGGGGATAGTGAGGGCAGACAGCAATCTTAATCATCTTTCGAATGAACTAGCATATCTTAATTGGAGAGAATATCCTTTTAAATGTTTGTCTCAAAGTTTTCAGCCAGAAAAACTAGTTCAGTTATACCTTGTTGGGAGCAGTATTAAACGACTATGGGAAGACACAAAGCTTTTGGATCTCTCTTACTCCAAAGATTTAGTTGAGATGTCAGATGTTAGAGAGGTCCTAAATCTTGAAAAGATAGAACTTAAAGGATGTATAAAGCTCCCAAAAATCAATCCATTGATTGGTCTTTTGAAAAAGCTTGATGTTTTGAATTTGAGAAATTGCAAAAACCTAGTAAGCTTACCCAATACCATATTGGGCTTGAATTATCTTGATTATCTGGATGTCTTTGGATGTTCAAAACTTTCACAAAGAGACTCAGTCAGCTATTTGTTGTTATCCTCTCCTACTTTCCCTTCTTCTCTCACTTGTTTGCGTGAACTCGATCTAAGCTTTTGTAACTTAGTTCGAATCCCTGATGCCATTGGAAAGTTAAGTTGCCTAGAACACCTAAATTTGGAGGGAAACAATTTTACCACACTTCCCAACCTCAATAACCTTTTCAGACTTCTCAAATTACATCCAAATATTGCATGTGTTACCTTAGGAAGTGAAATGCCTAGGTGGTTCAACAATCAATTTGTGAGCATGGACAATTCAATAAGGATTGATACCTCTTCTGTTATGCATGACGATAATTGGATTGGTGTAATGTGTTGTGCAATATTTCACATGGACATTGAAAGGGACATGACTGGTTATAGATCCATAGATCATAGTGTTAGAATTCCTCTAGTCGATTTGAGAAGCGATCTAGTCATTGATCATTCAGAACATATGTGGCTATTTTATTTGTCTCATCAAGAGTTTGGTGAACGACATTATGATTGCAGTTGGTACACACCTTATAACGGTGTTATTAGTGTGGAATTTACAAAACTGATGATGGACATGGGCAAATTCGAGAAGGGAGAACACCAATATGTTAAGGTGTATGTGAAGAAATATGGGTATTGGTAG 1734 0.3501 QLISQFQQLFIEQNLEICNASDGTYLVWTELHNARTLIILDNVDQDIRRCVGEGSIIIIISRDEHILKTHGVDDVYQVQLLSWEIVVHLSALGRLRYNKDRNVMNVLHISFDQLEEEKKIFLDIACFLHNHLYYNEILSIHGFDYENGIPSLIEKSLITCEHVDIYIHRLLIGLGQSIIREKSPKEPLKWSRSWDCKDFEKVMLDNEASENLEVIYIECDLLVGIVRADSNLNHLSNELAYLNWREYPFKCLSQSFQPEKLVQLYLVGSSIKRLWEDTKLLDLSYSKDLVEMSDVREVLNLEKIELKGCIKLPKINPLIGLLKKLDVLNLRNCKNLVSLPNTILGLNYLDYLDVFGCSKLSQRDSVSYLLLSSPTFPSSLTCLRELDLSFCNLVRIPDAIGKLSCLEHLNLEGNNFTTLPNLNNLFRLLKLHPNIACVTLGSEMPRWFNNQFVSMDNSIRIDTSSVMHDDNWIGVMCCAIFHMDIERDMTGYRSIDHSVRIPLVDLRSDLVIDHSEHMWLFYLSHQEFGERHYDCSWYTPYNGVISVEFTKLMMDMGKFEKGEHQYVKVYVKKYGYW* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1502 577 Gene3D Ribonuclease Inhibitor 207 367 IPR032675 -
Pvu2g1502 577 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 3 576 - -
Pvu2g1502 577 ProSiteProfiles Leucine-rich repeat profile. 405 426 IPR001611 GO:0005515
Pvu2g1502 577 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 576 IPR044974 GO:0006952
Pvu2g1502 577 SUPERFAMILY "Winged helix" DNA-binding domain 102 198 IPR036390 -
Pvu2g1502 577 SMART LRR_typ_2 322 346 IPR003591 -
Pvu2g1502 577 SMART LRR_typ_2 403 428 IPR003591 -
Pvu2g1502 577 SMART LRR_typ_2 380 402 IPR003591 -
Pvu2g1502 577 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 119 IPR027417 -
Pvu2g1502 577 Gene3D Ribonuclease Inhibitor 368 457 IPR032675 -
Pvu2g1502 577 SUPERFAMILY L domain-like 206 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1502 Pvu-Chr2 28235603 28238214 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1502 24 413 WRKY Transcription Factor Family AT4G12020 26.453 1.50e-28 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1502 - - pvu:PHAVU_002G145700g 1115.91