Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1493 ATGGCATCACAAGCTGCTGAAGTTGAGCATCCAAGGAAAGCATTTGGATGGGCAGCTAGGGACCCTTCTGGTCTTCTCTCACCTTTCAATTTCTCCAGAAGGGAAACTGCTGAAAAGGACGTGGCATTCAAAGTGTTGTATTGTGGGATATGTCACTCTGACCTCCACATGGCAAAGAACGAATGGGGCTTTTCAACCTATCCACTAGTGCCAGGGCATGAGGTGGTTGGTGTAGTGACACAGGTGGGAAGCAAAGTAGAAAAGTTCAAAGTTGGGGACAAGGTGGGTGTGGGATGCTTGGTTGATTCCTGCCGCACCTGCCAAAGCTGTTCAGAAGACCTTGAGAATTATTGTCCACAATATACTCTCACATATGGTGCCAAGTATAAAGATGGTACCATCACATATGGAGGTTACTCCGATTCAATGGTTGTAGATGAGCACTTTGTGGTTCGAATTCCAGATGGCTTACCACTTGATGCTGCTGCACCTCTCCTTTGTGCTGGCATCACAGTTTATAGCCCTCTCAGATATTTTGCACTAGACAAGCCTGGTCTGCATGTGGGTGTGGTTGGTCTCGGTGGACTAGGCCATATGGCTGTAAAATTTGCCAAAGCTTTTGGGGCAAAGGTCACAGTAATAAGTACATCGCCACACAAAAAGGAGGAAGCAATACAACATCTTGGAGCCGACTCTTTTCTGATAAGCCGTGACCATGATGAGATGCAGGGTGCCAATGGTACTTTGGATGGTATTATCGACACAGTTTCTGCCTTTCATCCTTTGTTACCTCTCATTGGTTTGCTCAAGTCTCATGGAAAGCTTGTAATGGTGGGTGCACCGGAGAAGCCTCTGGAGCTGCCAGTTTTTCCCTTACTCTCTGGGAGAAAGATAGTGGCAGGGAGTGGGATTGGAGGAATGAAGGAGACCCAAGAGATGATGGACTTTGCTGCGAAGCACAATGTAAAACCAGACATTGAGATCATTCCTATTGATTATGTCAACACTGCAATGGAGCGTCTACTCAAAGCAGATGTAAAATATAGATTTGTGATTGACATCGGAAACACACTAAAACCAAGTTCTTGA 1089 0.4591 MASQAAEVEHPRKAFGWAARDPSGLLSPFNFSRRETAEKDVAFKVLYCGICHSDLHMAKNEWGFSTYPLVPGHEVVGVVTQVGSKVEKFKVGDKVGVGCLVDSCRTCQSCSEDLENYCPQYTLTYGAKYKDGTITYGGYSDSMVVDEHFVVRIPDGLPLDAAAPLLCAGITVYSPLRYFALDKPGLHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPHKKEEAIQHLGADSFLISRDHDEMQGANGTLDGIIDTVSAFHPLLPLIGLLKSHGKLVMVGAPEKPLELPVFPLLSGRKIVAGSGIGGMKETQEMMDFAAKHNVKPDIEIIPIDYVNTAMERLLKADVKYRFVIDIGNTLKPSS* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1493 362 SMART PKS_ER_names_mod 24 352 IPR020843 GO:0016491
Pvu2g1493 362 CDD CAD1 15 353 - -
Pvu2g1493 362 Pfam Alcohol dehydrogenase GroES-like domain 39 152 IPR013154 -
Pvu2g1493 362 Gene3D - 17 354 - -
Pvu2g1493 362 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 3 361 - -
Pvu2g1493 362 PANTHER ALDEHYDE REDUCTASE 3 361 - -
Pvu2g1493 362 Pfam Zinc-binding dehydrogenase 195 318 IPR013149 -
Pvu2g1493 362 Gene3D - 168 324 - -
Pvu2g1493 362 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 72 86 IPR002328 GO:0008270|GO:0016491
Pvu2g1493 362 SUPERFAMILY GroES-like 20 185 IPR011032 -
Pvu2g1493 362 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 323 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1493 Pvu-Chr2 28125572 28127262 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1493 12 361 Monolignol Biosynthesis Gene Families AT4G37990 73.429 2.05e-178 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1493 - - gmx:100816901 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1493 2 28125572 28127262 Pvu3g2960 3 51335652 51337944 PCT