Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1492 ATGGCAGAAACTGAGCATCCAAGGAAAGCATTCGGATGGGCAGCTAGGGACCCTTCTGGCCTTCTCACACCTTTCCATTTCTCCAGAAGAGAAACAGGTGAAAAAGATGTGGCATTCAAAGTGTTGTACTGTGGAATATGCCACTCGGACCTTCACTTTGCCAAGAACGAATGGGGCACTTCCACCTATCCATTAGTCCCAGGGCACGAGATAGCTGGTGTGGTGACAGAGGTGGGAAGTAAAGTGGTAAAGTTCAAAGTTGGAGACAAGGTGGGAGTAGGATGCATGGTTGATTCCTGTCACACCTGCCTAAACTGTGTTGACAATCTTGAGAATTATTGTCCACAATACACTCTCACATATAGTGCCAAATATAGAGATGGCACCATCACATATGGAGGCTTCTCTGACTCAATGGTTGTGGATGAACATTTTGTGATTCGCATTCCTGATGGCTTACCACTTGAAGCTGCTGCACCTCTCCTATGTGCAGGGATCACAGTGTTTAGCCCTCTCAGATATTTTGCACTTGATAAGCCTGGTCTAAATGTGGGTGTGGTTGGTCTCGGTGGACTTGGCCATATGGCTGTGAAGTTTGCCAAAGCTTTTGGGGCTAAGGTCACGGTAATAAGTACATCACCCAACAAAAAGAAAGAAGCAATGCAACATCTAGGAGCTGACTCCTTTATCATAAGCCGTGACCCAGATCAGATGCAGGCTGCAAATGGTACTTTGGATGGTATTATTGATACGGTTTCTGCCGTTCATCCTCTCTTACCTCTCATTGGTTTGCTTAAGTCTCATGGAAAGCTTGTAGCTGTGGGTGCACCAGAGAAACCTTTGGAGCTTTCTATTATTTCACTAATTTTAGGGAGAAAGATAGTGGCTGGGAGTAAGATAGGAGGGATGAAGGAGACCCAAGAGATAATGGACTTTGCTGTGTTACACAATGTAAAACCAGACATTGAGATCATTCCTATTGATTATGTCAACACTGCAATGGAGCGTCTCCTCAAAGCAGACGTAAAATATAGATTTGTGATTGATATCGGAAACACACTAAAACCAAGCTCTTGA 1077 0.4448 MAETEHPRKAFGWAARDPSGLLTPFHFSRRETGEKDVAFKVLYCGICHSDLHFAKNEWGTSTYPLVPGHEIAGVVTEVGSKVVKFKVGDKVGVGCMVDSCHTCLNCVDNLENYCPQYTLTYSAKYRDGTITYGGFSDSMVVDEHFVIRIPDGLPLEAAAPLLCAGITVFSPLRYFALDKPGLNVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKKEAMQHLGADSFIISRDPDQMQAANGTLDGIIDTVSAVHPLLPLIGLLKSHGKLVAVGAPEKPLELSIISLILGRKIVAGSKIGGMKETQEIMDFAVLHNVKPDIEIIPIDYVNTAMERLLKADVKYRFVIDIGNTLKPSS* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1492 358 Gene3D - 13 350 - -
Pvu2g1492 358 Pfam Zinc-binding dehydrogenase 191 312 IPR013149 -
Pvu2g1492 358 PANTHER ALDEHYDE REDUCTASE 3 357 - -
Pvu2g1492 358 CDD CAD1 11 349 - -
Pvu2g1492 358 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Pvu2g1492 358 Gene3D - 164 320 - -
Pvu2g1492 358 SUPERFAMILY GroES-like 16 181 IPR011032 -
Pvu2g1492 358 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491
Pvu2g1492 358 Pfam Alcohol dehydrogenase GroES-like domain 35 148 IPR013154 -
Pvu2g1492 358 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 3 357 - -
Pvu2g1492 358 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 153 318 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1492 Pvu-Chr2 28120286 28122429 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1492 8 357 Monolignol Biosynthesis Gene Families AT4G37990 70.000 6.05e-169 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1492 - K23232 gmx:100816901 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1492 2 28120286 28122429 Pvu3g2959 3 51328145 51330074 PCT