Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1491 ATGTCGAACGTGTTAGCAGGATGTGAAAACGAAGAAGTTGTTACCTATGGGTGGGCAGCTAGAGACGATTCAGGAATTCTCTCCCCGTTCCACTTTACCAGAAGGGCAAATGGTGATAACGATATCACACTTGACATACTCTACTCTGGGATTTGCCACACGGATCTCCACATGGTGAAGGACGACTTTGGAATGTCTATCTATCCAATGGTTCCTGGGCATGAGATTGTGGGAAAAGTGACAAAGGTGGGTAGCAAAGTCACAAAATTCAGTGTTGGGGACATAGCTGGTGTGGGTGGCTCTGTGGGTTCGTGTGGTTCGTGTTCGGACTGCAGCGAGGGCTTCTATGTATATTGTCCAAAAATGATTTTAACCTACAGTGCACGCTACCATGATGGAACAGTAACCCAAGGTGGATACTCTGATAACCTAGTGGTTGATCACAATTTTGCGGTGCTAATCCCAAAGTCCATGCCACTGGCTAGTACAGCCCCCTTGTTGTGTGCTGGAATCACAGTTTACAGCCCACTGAAGTATCATGGGCTTACTAAGCCCGGATTGCACTTGGGTGTGGTGGGCCTGGGAGGCCTAGGTCACGTGGCTGTGAAGTTTGCCAAGGCTTTTGATATGCATGTCACTGTGATAAGTACATCTCCCAGCAAGAAGAAGGAAGCACTGGAGAGGCTTGGTGCAGATGCATTCTTGGTTAGTCGAGACCAACAACAGTTGCAGGATGCCGTAGGCACAATGGATGCCATTCTTGACACAGTTTCAGCTAATCACTCCATCCAATCACTGATTGGTTTATTGAAAACAAGTGGAAAGTTGATTTTGGTGGGTGGACCAGCCAATCCTCTTGAGGTTTTAGCTATGCCTTTGCTTTTGGGGAGAAAGATGATTGCTGGTAGTGCAGGAGGTGGGAGAGAAGAGATTCAAGAGATGATTAATTTTGCAGCAAAGCACCATATTACAGCAGATGTGGAAGTGATTTCAATGGATTACGTGAACACTGCCTTGGAGAGACTAGAAAAAAATGATGTTAAATATCGCTTTGTCATTGATGTGGCAAACACTATATAA 1080 0.4583 MSNVLAGCENEEVVTYGWAARDDSGILSPFHFTRRANGDNDITLDILYSGICHTDLHMVKDDFGMSIYPMVPGHEIVGKVTKVGSKVTKFSVGDIAGVGGSVGSCGSCSDCSEGFYVYCPKMILTYSARYHDGTVTQGGYSDNLVVDHNFAVLIPKSMPLASTAPLLCAGITVYSPLKYHGLTKPGLHLGVVGLGGLGHVAVKFAKAFDMHVTVISTSPSKKKEALERLGADAFLVSRDQQQLQDAVGTMDAILDTVSANHSIQSLIGLLKTSGKLILVGGPANPLEVLAMPLLLGRKMIAGSAGGGREEIQEMINFAAKHHITADVEVISMDYVNTALERLEKNDVKYRFVIDVANTI* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1491 359 Pfam Alcohol dehydrogenase GroES-like domain 40 152 IPR013154 -
Pvu2g1491 359 SUPERFAMILY GroES-like 22 186 IPR011032 -
Pvu2g1491 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 73 87 IPR002328 GO:0008270|GO:0016491
Pvu2g1491 359 Gene3D - 18 355 - -
Pvu2g1491 359 Gene3D - 169 325 - -
Pvu2g1491 359 SMART PKS_ER_names_mod 25 353 IPR020843 GO:0016491
Pvu2g1491 359 PANTHER ALDEHYDE REDUCTASE 1 359 - -
Pvu2g1491 359 Pfam Zinc-binding dehydrogenase 196 319 IPR013149 -
Pvu2g1491 359 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 1 359 - -
Pvu2g1491 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 323 IPR036291 -
Pvu2g1491 359 CDD CAD1 17 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1491 Pvu-Chr2 28104096 28105903 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1491 16 359 Monolignol Biosynthesis Gene Families AT4G37990 64.535 3.61e-154 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1491 - K23232 gmx:100801089 589.341