Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1490 ATGGCTTCACAACCAGAAACAGAGCATCCCAACAAGGCTTTTGGATGGGCAGCACAGGACACATCTGGTCATCTCTCCCCATTCAAGTTCTCCAGAAGGGCAACAGGGGAGAATGATGTTGCATTCAAAGTACTGTACTGTGGAATATGTCACTCAGACTTACATATGTTAAAGAACGAGTGGGGCGTCTCAGTCTATCCTCTTGTTCCTGGGCACGAGGTTGCTGGTTTGGTGACAGAGGTGGGAAAAAATGTGCAAAAGTTCAAAGTTGGAGACAAAGTTGGTGTGGGTTGCATGGTTGGATCCTGTCACTCCTGTGAAAGCTGTAGTGAAGATCTTGAGAATTACTGCCCCAAAATGATTCTGACATACAATGCCAAGTATGTTGATGGCACCATAACATACGGAGGCTACTCTGACTCAATGGTTGTAGATGAACAATTTGCGATTCGCATTCCAGATAACCTACCTCTTGATGCTGCTGCTCCTCTCCTGTGTGCTGGGATCACTGTCTATAGCCCTTTGAAATATTATGGACTTGACAAGCCTGGCCTTCATATTGGTGTGGTTGGTCTTGGTGGACTAGGTCACATGGCTGTCAAGTTTGCCAAAGCTCTTGGAGTTAAGGTCACAGTAATCAGCACATCTCCCGGCAAAAAGAAGGAAGCCATTGAGAATATGGGGGCTGACTCATTTGTTGTTAGCCGTGAACAAGATGAAATGATGGCTGTAATGGGAACCTTTGATGGAATCATTGACACAGTTTCTGCTAACCATCCCCTCGTGCCTTTGATTGGCCTGTTGAAGCCTCATGGTAAATTAGTCATGGTTGGTGCACCGGAGAAGCCTCTGGAAGTTCCAGCATTTTCTTTACTTATGGGGAGGAAGATGATTGCTGGCAGTGCAATGGGAGGGATAAAAGAGACGCAAGAAATGGTTGATTTTGCTGCCAAGCATGGTGTGAAACCTGACATCGAAGTTATTGGCATGGATTATGTGAACACTGCAATGGAGCGCCTCCTGAAAGCAGACGTGAAGTACCGATTTGTTATTGATATTGGAAACACGTTGAAGGCAAGTTCTTGA 1086 0.4567 MASQPETEHPNKAFGWAAQDTSGHLSPFKFSRRATGENDVAFKVLYCGICHSDLHMLKNEWGVSVYPLVPGHEVAGLVTEVGKNVQKFKVGDKVGVGCMVGSCHSCESCSEDLENYCPKMILTYNAKYVDGTITYGGYSDSMVVDEQFAIRIPDNLPLDAAAPLLCAGITVYSPLKYYGLDKPGLHIGVVGLGGLGHMAVKFAKALGVKVTVISTSPGKKKEAIENMGADSFVVSREQDEMMAVMGTFDGIIDTVSANHPLVPLIGLLKPHGKLVMVGAPEKPLEVPAFSLLMGRKMIAGSAMGGIKETQEMVDFAAKHGVKPDIEVIGMDYVNTAMERLLKADVKYRFVIDIGNTLKASS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1490 361 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Pvu2g1490 361 Gene3D - 16 353 - -
Pvu2g1490 361 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 1 360 - -
Pvu2g1490 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 322 IPR036291 -
Pvu2g1490 361 CDD CAD1 14 352 - -
Pvu2g1490 361 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Pvu2g1490 361 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Pvu2g1490 361 Gene3D - 167 323 - -
Pvu2g1490 361 SUPERFAMILY GroES-like 21 184 IPR011032 -
Pvu2g1490 361 PANTHER ALDEHYDE REDUCTASE 1 360 - -
Pvu2g1490 361 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1490 Pvu-Chr2 28079750 28082617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1490 12 358 Monolignol Biosynthesis Gene Families AT4G37990 72.046 4.72e-173 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1490 - K23232 gmx:100809071 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1490 2 28079750 28082617 Pvu2g1490 2 28079750 28082617 ECH