Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1482 GTGAAATCTATGATTGAGAGATACAATACATGCAAAGAAGAACAACACCATCTGATAAATCCAGAATCCGAAGTCAAGTTTTGGCAGAGGGAGGCAGAGATTCTAAGGCAACAACTACAGATCCTACAAGAAAACCATCGGCAATTGATGGGAGAACAACTTTATGGTCTGAGTGTCAAAAACCTACAAGATCTAGAGAATCAACTGGAAATGAGCCTCCAAGGTGTCCGTATAAAAAAGGAACAAATTCTAAAAGATGAAATCCAAGAGCTGAACCGAAAGGGAAACCTTATCTTCCAGGAAAATGTGGAACTGTACAAGAAGGTCTATGGTACAACCGATACAGCGACAACAAGCAGAAATGCATTTGATCCACTTCCATATGGTATGCATGTAGGAGGGCATTCACAAGAATTAGTCCAACTTCAGTTATGCCAGCCTGAACAAGAAGCTTATGACACATCCGACACTGCCACAAAATAA 483 0.4058 VKSMIERYNTCKEEQHHLINPESEVKFWQREAEILRQQLQILQENHRQLMGEQLYGLSVKNLQDLENQLEMSLQGVRIKKEQILKDEIQELNRKGNLIFQENVELYKKVYGTTDTATTSRNAFDPLPYGMHVGGHSQELVQLQLCQPEQEAYDTSDTATK* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1482 160 PANTHER MADS-BOX TRANSCRIPTION FACTOR 23 ISOFORM X1 1 159 - -
Pvu2g1482 160 ProSiteProfiles K-box domain profile. 25 116 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pvu2g1482 160 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 159 - -
Pvu2g1482 160 Pfam K-box region 22 109 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pvu2g1482 160 Coils Coil 25 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1482 Pvu-Chr2 27980116 27983828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1482 1 158 MADS-box Gene Family AT2G22630 54.070 7.63e-53 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1482 K09264 - gmx:100778427 276.174